AutismKB 2.0

Annotation Detail for CLCNKB


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Basic Information Top
Gene Symbol:CLCNKB ( CLCKB,ClC-K2,ClC-Kb,MGC24087,hClC-Kb )
Gene Full Name: chloride channel Kb
Band: 1p36.13
Quick LinksEntrez ID:1188; OMIM: 602023; Uniprot ID:CLCKB_HUMAN; ENSEMBL ID: ENSG00000184908; HGNC ID: 2027
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
679N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
679N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
25S-palmitoylHMM predict
111Phosphoserine(ATM)HMM predict
115Phosphothreonine(MAPK)HMM predict
117Phosphoserine(CDC2)HMM predict
117O-linkedHMM predict
186Phosphothreonine(PKA)HMM predict
193N-linkedHMM predict
198N-linkedHMM predict
327Phosphotyrosine(SRC)HMM predict
366Phosphoserine(IKK)HMM predict
373N-linkedHMM predict
375Phosphoserine(ATM)HMM predict
475O-linkedHMM predict
475O-linkedHMM predict
481O-linkedHMM predict
552N-linkedHMM predict
562Phosphothreonine(MAPK)HMM predict
636Phosphoserine(CDC2)HMM predict
640Phosphoserine(CK1)HMM predict
676AlanineHMM predict
679N-linkedHMM predict
679AsparagineHMM predict
682N-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_000085
  • Location:chr1 16242938-16256062
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 16238403 16238670 267 4402
CTCF G2GSE9613 16242494 16243161 667 111
hScc1 BcellGSE12603 16242033 16242601 568 622
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 16256126 16256544 418 273
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP JurkatGSE17954 16252934 16254006 1072 0
CTCF CD4GSE12889 16255263 16255445 182 0
CTCF CD4SISSRdata 16255263 16255445 182 0
CTCF HelaGSE12889 16255269 16255419 150 0
CTCF JurkatGSE12889 16255275 16255570 295 0
CTCF G2GSE9613 16244017 16244286 269 0
CTCF G2GSE9613 16248615 16249232 617 0
CTCF G2GSE9613 16251283 16251527 244 0
CTCF G2GSE9613 16254895 16255676 781 0
hScc1 BcellGSE12603 16247630 16247832 202 0
hScc1 BcellGSE12603 16254751 16255904 1153 0
hScc1 CdLSGSE12603 16254996 16255840 844 0
hScc1 G2GSE9613 16254895 16255631 736 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018