Annotation Detail for FGD4
Basic Information Top
| Gene Symbol: | FGD4 ( CMT4H,DKFZp313E1818,DKFZp434K1572,FLJ34370,FLJ42663,FRABP,MGC57222,ZFYVE6 ) |
|---|---|
| Gene Full Name: | FYVE, RhoGEF and PH domain containing 4 |
| Band: | 12p11.21 |
| Quick Links | Entrez ID:121512; OMIM: 611104; Uniprot ID:FGD4_HUMAN; ENSEMBL ID: ENSG00000139132; HGNC ID: 19125 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 702 | Phosphoserine (By similarity). | |
| Location(AA) | Modifications | Resource |
|---|
| Location(AA) | Modification | Resource |
|---|---|---|
| 10 | Phosphoserine(IKK) | HMM predict |
| 36 | Phosphotyrosine(INSR) | HMM predict |
| 52 | Phosphothreonine(CDC2) | HMM predict |
| 52 | Phosphothreonine(CDK) | HMM predict |
| 52 | Phosphothreonine(MAPK) | HMM predict |
| 61 | Phosphothreonine(CDC2) | HMM predict |
| 61 | Phosphothreonine(CDK) | HMM predict |
| 68 | Phosphoserine(ATM) | HMM predict |
| 77 | N-linked | HMM predict |
| 115 | Phosphoserine(IKK) | HMM predict |
| 137 | O-linked | HMM predict |
| 141 | O-linked | HMM predict |
| 141 | O-linked | HMM predict |
| 141 | Phosphoserine(IKK) | HMM predict |
| 143 | O-linked | HMM predict |
| 146 | Phosphoserine(IKK) | HMM predict |
| 150 | N-linked | HMM predict |
| 281 | Phosphothreonine(PKC) | HMM predict |
| 315 | N-linked | HMM predict |
| 317 | Phosphothreonine(PKC) | HMM predict |
| 418 | N-linked | HMM predict |
| 421 | N-linked | HMM predict |
| 436 | N-linked | HMM predict |
| 466 | Phosphothreonine(PKC) | HMM predict |
| 622 | Phosphothreonine(CK2) | HMM predict |
| 652 | Phosphotyrosine(INSR) | HMM predict |
| 758 | Proline | HMM predict |
| 766 | S-farnesyl | HMM predict |
- RefSeq ID: NM_139241
- Location:chr12 32546360-32684939
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 32538901 | 32539080 | 179 | 7370 |
| ER | E2-MCF7 | GSE14664 | 32534835 | 32534876 | 41 | 11505 |
| ER | E2-MCF7 | GSE14664 | 32535826 | 32535911 | 85 | 10492 |
| ER | E2-MCF7 | GSE14664 | 32536067 | 32536105 | 38 | 10275 |
| ER | Fulvestrant-MCF7 | GSE14664 | 32529189 | 32529231 | 42 | 17151 |
| ER | Fulvestrant-MCF7 | GSE14664 | 32535825 | 32535889 | 64 | 10504 |
| Oct1 | H2O2-Hela | GSE14283 | 32529781 | 32529823 | 42 | 16559 |
| Oct1 | Hela | GSE14283 | 32529781 | 32529824 | 43 | 16558 |
| Oct1 | Hela | GSE14283 | 32540301 | 32540329 | 28 | 6046 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 32701769 | 32702168 | 399 | 17029 |
| Oct1 | Hela | GSE14283 | 32690509 | 32690544 | 35 | 5587 |
| hScc1 | Bcell | GSE12603 | 32701837 | 32702132 | 295 | 17045 |
| hScc1 | CdLS | GSE12603 | 32701804 | 32702200 | 396 | 17063 |
| hScc1 | CdLS | GSE12603 | 32703537 | 32703781 | 244 | 18720 |
| hScc1 | G2 | GSE9613 | 32701837 | 32702200 | 363 | 17079 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| FOXA1 | MCF7 | GSE15244 | 32578220 | 32578607 | 387 | 0 |
| H3ac | HepG2 | E | 32581425 | 32581829 | 404 | 0 |
| H3ac | HepG2 | E | 32585875 | 32586584 | 709 | 0 |
| NRSF | Jurkat | SISSRdata | 32604245 | 32604381 | 136 | 0 |
| Nanog | hES | GSE18292 | 32603935 | 32604372 | 437 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 32648546 | 32648581 | 35 | 0 |
| Oct1 | Hela | GSE14283 | 32600116 | 32600148 | 32 | 0 |
| Oct1 | Hela | GSE14283 | 32611773 | 32611803 | 30 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 32612411 | 32612780 | 369 | 0 |
Validated miRNA targets