AutismKB 2.0

Annotation Detail for PLD4


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Basic Information Top
Gene Symbol:PLD4 ( C14orf175 )
Gene Full Name: phospholipase D family, member 4
Band: 14q32.33
Quick LinksEntrez ID:122618; OMIM: NA; Uniprot ID:PLD4_HUMAN; ENSEMBL ID: ENSG00000166428; HGNC ID: 23792
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
472Phosphothreonine.
Location(AA) Modifications Resource
453PhosphothreoninePhospho.ELM 6.0
472Phosphothreonine.Swiss-Prot 53.0
Location(AA) Modification Resource
108O-linkedHMM predict
112PhosphoserineHMM predict
112Phosphoserine(IKK)HMM predict
114O-linkedHMM predict
150N-linkedHMM predict
154Phosphoserine(CK1)HMM predict
182O-linkedHMM predict
226Phosphotyrosine(INSR)HMM predict
281N-linkedHMM predict
287N-linkedHMM predict
306O-linkedHMM predict
336Phosphotyrosine(EGFR)HMM predict
345Phosphothreonine(PKC)HMM predict
417N-linkedHMM predict
420N-linkedHMM predict
427N-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_138790
  • Location:chr14 104462231-104470617
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 104461089 104461567 478 904
NFkBII GM10847GSE19485 104459916 104460710 794 1919
NFkBII GM15510GSE19485 104459907 104460684 777 1936
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 104470835 104471014 179 307
CTCF CD4SISSRdata 104470835 104471014 179 307
CTCF JurkatGSE12889 104470866 104471047 181 339
CTCF G2GSE9613 104470278 104471067 789 55
CTCF G2GSE9613 104471682 104472086 404 1267
KLF4 hESGSE17917 104471167 104471401 234 667
Myc K562GSE19551 104470680 104471137 457 291
hScc1 CdLSGSE12603 104470278 104471067 789 55
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 104464409 104464774 365 0
CTCF G2GSE9613 104466293 104467389 1096 0
NFkBII GM10847GSE19485 104463284 104464727 1443 0
TFAP2C MCF7GSE21234 104468240 104468784 544 0
VDR GM10861-stimGSE22484 104463303 104464746 1443 0
hScc1 BcellGSE12603 104470314 104470908 594 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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