Annotation Detail for CCR1

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Basic Information Top

Gene Symbol:	CCR1 ( CD191,CKR-1,CKR1,CMKBR1,HM145,MIP1aR,SCYAR1 )
Gene Full Name:	chemokine (C-C motif) receptor 1
Band:	3p21.31
Quick Links	Entrez ID:1230; OMIM: 601159; Uniprot ID:CCR1_HUMAN; ENSEMBL ID: ENSG00000163823; HGNC ID: 1602
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:1 results
Experimental PTM Sites from dbPTM:1 results
Predicted PTM Sites by profile HMM from dbPTM:8 results

Location(AA)	Modification
5	N-linked (GlcNAc...) (Potential).

Location(AA)	Modification	Resource
10	Phosphotyrosine(Syk)	HMM predict
10	Sulfotyrosine	HMM predict
18	Sulfotyrosine	HMM predict
67	N-linked	HMM predict
132	Phosphotyrosine(Jak)	HMM predict
341	Phosphoserine(PKB)	HMM predict
343	O-linked	HMM predict
343	Phosphoserine(CDC2)	HMM predict

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_001295
Location:chr3 46218203-46224835
strand:-

Upstream the gene:11 results
Downstream the gene:1 results
Inside the gene:2 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	CD4	GSE12889	46224887	46225084	197	150
CTCF	CD4	SISSRdata	46224887	46225084	197	150
CTCF	G2	GSE9613	46224800	46225313	513	221
CTCF	G2	GSE9613	46231313	46231775	462	6709
FOXA1	MCF7	GSE15244	46231487	46231775	288	6796
FOXA1	MCF7	GSE15244	46232108	46232738	630	7588
P300	T30-glioblastoma	GSE21026	46232499	46233015	516	7922
hScc1	Bcell	GSE12603	46224656	46225447	791	216
hScc1	Bcell	GSE12603	46230942	46231775	833	6523
hScc1	CdLS	GSE12603	46224448	46225276	828	27
hScc1	CdLS	GSE12603	46230883	46231775	892	6494

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
p63	keratinocytes	GSE17611	46200692	46201634	942	17041

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	G2	GSE9613	46223141	46223436	295	0
RARA	MCF7	GSE15244	46224448	46224902	454	0

Validated miRNA targets

miR Walk:4 results
Tarbase V5.0:0 results

Micro RNA Name	Stem Loop Name	The chromosome that miRNA located	Publication
hsa-miR-1	hsa-mir-1-2	18	19497108
hsa-miR-1	hsa-mir-1-1	20	19497108
hsa-miR-133a	hsa-mir-133a-1	18	19497108
hsa-miR-133a	hsa-mir-133a-2	20	19497108

Cis-Nats regulation

Cluster ID	Plue Type	Plus Gene Name	Plus Chromosome	Plus Start	Plus End	Overlap Length	Minus Type	Minus Gene Name	Minus Chromosome	Minus Star	Minus End	Type
18022	mRNA	CCR3	chr3	46139468	46283103	6633	mRNA	CCR1	chr3	46218203	46224836	Non-exonic Bidirectional (NOB) pairs

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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