AutismKB 2.0

Annotation Detail for SPACA3


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Basic Information Top
Gene Symbol:SPACA3 ( 1700025M08Rik,ALLP17,CT54,LYC3,LYZL3,MGC119058,SLLP1 )
Gene Full Name: sperm acrosome associated 3
Band: 17q11.2
Quick LinksEntrez ID:124912; OMIM: 612749; Uniprot ID:SACA3_HUMAN; ENSEMBL ID: ENSG00000141316; HGNC ID: 16260
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
16PhosphoserineHMM predict
16Phosphoserine(IKK)HMM predict
16Phosphoserine(CDC2)HMM predict
19Phosphoserine(IKK)HMM predict
20Phosphoserine(CDC2)HMM predict
22Phosphoserine(CK1)HMM predict
31Phosphoserine(IKK)HMM predict
34Phosphoserine(CK1)HMM predict
38Phosphoserine(IKK)HMM predict
41Phosphoserine(CK1)HMM predict
41Phosphoserine(ATM)HMM predict
76S-palmitoylHMM predict
80S-palmitoylHMM predict
153N-linkedHMM predict
157N-linkedHMM predict
204LysineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_173847
  • Location:chr17 28342994-28349004
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 H2O2-HelaGSE14283 28340018 28340050 32 2961
c MYCMCF7 28341623 28342810 1187 778
hScc1 BcellGSE12603 28341623 28342204 581 1081
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 28349499 28349820 321 655
CTCF CD4SISSRdata 28349499 28349820 321 655
CTCF JurkatGSE12889 28349534 28349886 352 706
CTCF G2GSE9613 28349046 28350059 1013 548
ER E2-MCF7GSE14664 28355013 28355053 40 6029
Oct1 HelaGSE14283 28354938 28354985 47 5957
Oct1 HelaGSE14283 28355020 28355054 34 6033
RNAII Tamoxifen-MCF7GSE14664 28355008 28355050 42 6025
hScc1 BcellGSE12603 28348979 28349925 946 448
hScc1 CdLSGSE12603 28349440 28350279 839 855
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
hScc1 BcellGSE12603 28343500 28343740 240 0
hScc1 CdLSGSE12603 28344993 28345590 597 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018