AutismKB 2.0

Annotation Detail for SLC43A2


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Basic Information Top
Gene Symbol:SLC43A2 ( FLJ23848,LAT4,MGC34680 )
Gene Full Name: solute carrier family 43, member 2
Band: 17p13.3
Quick LinksEntrez ID:124935; OMIM: 610791; Uniprot ID:LAT4_HUMAN; ENSEMBL ID: ENSG00000167703; HGNC ID: 23087
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
55N-linked (GlcNAc...) (Potential).
58N-linked (GlcNAc...) (Potential).
274Phosphoserine.
278Phosphoserine.
560N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_152346
  • Location:chr17 1424445-1478879
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 1480136 1480404 268 1391
CTCF CD4SISSRdata 1480136 1480404 268 1391
CTCF JurkatGSE12889 1480110 1480383 273 1367
CTCF G2GSE9613 1480156 1480494 338 1446
Rb GrowingGSE19898 1479704 1479829 125 887
hScc1 BcellGSE12603 1478686 1480494 1808 711
hScc1 CdLSGSE12603 1478551 1480494 1943 643
p130 shRbSenescentGSE19898 1478949 1479131 182 161
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 1423975 1424351 376 283
ER MCF7GSE19013 1422188 1422819 631 1942
hScc1 CdLSGSE12603 1424115 1424486 371 145
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP JurkatGSE17954 1442102 1443964 1862 0
CBP T30-glioblastomaGSE21026 1426958 1427983 1025 0
CBP T30-glioblastomaGSE21026 1439711 1441075 1364 0
CTCF G2GSE9613 1441298 1441606 308 0
CTCF G2GSE9613 1467746 1467894 148 0
CTCF G2GSE9613 1471548 1471730 182 0
CTCF G2GSE9613 1474952 1475183 231 0
CTCF G2GSE9613 1478009 1479405 1396 0
ER MCF7GSE19013 1437077 1437905 828 0
ER MCF7GSE19013 1470419 1471483 1064 0
Fos K562GSE19551 1439966 1440570 604 0
Fos K562GSE19551 1478207 1479242 1035 0
H3K4me3 colorectalcancer 1476705 1476956 251 0
H3ac HepG2E 1476564 1476984 420 0
LIN9 G0GSE7516 1478009 1478841 832 0
Myc K562GSE19551 1467663 1468311 648 0
NFkBII GM10847GSE19485 1456267 1457993 1726 0
NFkBII GM12878GSE19485 1455785 1458290 2505 0
NFkBII GM12892GSE19485 1455864 1458362 2498 0
NFkBII GM18526GSE19485 1455807 1458249 2442 0
P300 T30-glioblastomaGSE21026 1426846 1427882 1036 0
P300 T30-glioblastomaGSE21026 1439691 1441023 1332 0
RARG MCF7GSE15244 1436752 1437097 345 0
RARG MCF7GSE15244 1451544 1452161 617 0
Rb GrowingGSE19898 1440155 1440371 216 0
Rb GrowingGSE19898 1469445 1469606 161 0
Rb SenescentGSE19898 1439954 1440418 464 0
STAT1 IFNSISSRdata 1467606 1468454 848 0
TFAP2C MCF7GSE21234 1439895 1440388 493 0
TFAP2C MCF7GSE21234 1470221 1471086 865 0
VDR GM10855-stimGSE22484 1456166 1458324 2158 0
hScc1 BcellGSE12603 1423975 1425005 1030 0
hScc1 BcellGSE12603 1438777 1438941 164 0
hScc1 BcellGSE12603 1441182 1441580 398 0
hScc1 BcellGSE12603 1454726 1454994 268 0
hScc1 BcellGSE12603 1455710 1455971 261 0
hScc1 BcellGSE12603 1468470 1468717 247 0
hScc1 BcellGSE12603 1474952 1475150 198 0
hScc1 BcellGSE12603 1477781 1478189 408 0
hScc1 CdLSGSE12603 1432431 1432577 146 0
p130 QuiescentGSE19898 1478344 1478618 274 0
p130 SenescentGSE19898 1427245 1427842 597 0
p130 SenescentGSE19898 1478184 1478443 259 0
p130 shRbQuiescentGSE19898 1439915 1440530 615 0
p130 shRbSenescentGSE19898 1478488 1478772 284 0
p63 keratinocytesGSE17611 1447788 1448269 481 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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