Annotation Detail for LYPLAL1

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Basic Information Top

Gene Symbol:	LYPLAL1 ( FLJ99730,KIAA1238 )
Gene Full Name:	lysophospholipase-like 1
Band:	1q41
Quick Links	Entrez ID:127018; OMIM: NA; Uniprot ID:LYPL1_HUMAN; ENSEMBL ID: ENSG00000143353; HGNC ID: 20440
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:1 results
Experimental PTM Sites from dbPTM:1 results
Predicted PTM Sites by profile HMM from dbPTM:4 results

Location(AA)	Modification
2	N-acetylalanine.

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_138794
Location:chr1 217413845-217451780
strand:+

Upstream the gene:0 results
Downstream the gene:1 results
Inside the gene:14 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
TFAP2C	MCF7	GSE21234	217455342	217455676	334	3729

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
H3K4me3	colorectal	cancer	217414242	217415242	1000	0
H3ac	HepG2	E	217414041	217415278	1237	0
H3ac	HepG2	E	217416255	217416644	389	0
NFkBII	GM12878	GSE19485	217427606	217430319	2713	0
RARA	MCF7	GSE15244	217414383	217415023	640	0
Rb	Growing	GSE19898	217413940	217414083	143	0
Rb	Senescent	GSE19898	217413716	217414059	343	0
TAF	k562	GSE8489	217414169	217416465	2296	0
hScc1	Bcell	GSE12603	217413717	217414592	875	0
hScc1	CdLS	GSE12603	217413616	217414169	553	0
p130	Quiescent	GSE19898	217413848	217414190	342	0
p130	shRbQuiescent	GSE19898	217413878	217414315	437	0
p130	shRbSenescent	GSE19898	217413874	217414346	472	0
p63	keratinocytes	GSE17611	217417067	217417745	678	0

Validated miRNA targets

Cis-Nats regulation

Cluster ID	Plue Type	Plus Gene Name	Plus Chromosome	Plus Start	Plus End	Overlap Length	Minus Type	Minus Gene Name	Minus Chromosome	Minus Star	Minus End	Type
2350	mRNA	LYPLAL1	chr1	215735617	215773553	81	EST		chr1	215648261	215735698	Sense/Antisense (SA) pairs

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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