AutismKB 2.0

Annotation Detail for C1orf173


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Basic Information Top
Gene Symbol:C1orf173 ( DKFZp547I048,DKFZp761G1720,DKFZp781L0319,MGC90412,RP11-653A5.1 )
Gene Full Name: chromosome 1 open reading frame 173
Band: 1p31.1
Quick LinksEntrez ID:127254; OMIM: NA; Uniprot ID:CA173_HUMAN; ENSEMBL ID: ENSG00000178965; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001002912
  • Location:chr1 74806383-74912009
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER E2-MCF7GSE14664 74921439 74921473 34 9447
ER Fulvestrant-MCF7GSE14664 74921440 74921474 34 9448
Oct1 HelaGSE14283 74921442 74921472 30 9448
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 HelaGSE14283 74803058 74803089 31 3310
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER E2-MCF7GSE14664 74862795 74862829 34 0
ER MCF7GSE19013 74890654 74891307 653 0
NRSF JurkatSISSRdata 74810189 74810432 243 0
NRSF-poly JurkatQuESTdata 74810149 74810484 335 0
Oct1 H2O2-HelaGSE14283 74846257 74846285 28 0
Oct1 H2O2-HelaGSE14283 74853872 74853900 28 0
Oct1 HelaGSE14283 74862796 74862828 32 0
RNAII Tamoxifen-MCF7GSE14664 74862795 74862830 35 0
Stat6 IL-4-hr1GSE17850 74882517 74883008 491 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
978 EST chr1 74767439 74799254 173 mRNA DKFZp547I048 chr1 74749889 74851443Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018