AutismKB 2.0

Annotation Detail for UBXN10


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Basic Information Top
Gene Symbol:UBXN10 ( FLJ25429,UBXD3 )
Gene Full Name: UBX domain protein 10
Band: 1p36.12
Quick LinksEntrez ID:127733; OMIM: NA; Uniprot ID:UBX10_HUMAN; ENSEMBL ID: ENSG00000162543; HGNC ID: 26354
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_152376
  • Location:chr1 20385164-20392527
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 20383745 20383890 145 1347
CTCF CD4SISSRdata 20383745 20383890 145 1347
CTCF G2GSE9613 20384685 20385179 494 233
GABP k562GSE8489 20378331 20379336 1005 6331
GABP k562GSE8489 20384247 20384685 438 699
Gata2 K562GSE18868 20383596 20385258 1662 738
SRF k562GSE8489 20384247 20384716 469 683
TAF k562GSE8489 20384247 20384662 415 710
hScc1 BcellGSE12603 20369942 20370204 262 15092
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 20394350 20394690 340 1993
CTCF CD4SISSRdata 20394350 20394690 340 1993
CTCF JurkatGSE12889 20412012 20412201 189 19579
CTCF G2GSE9613 20394094 20394693 599 1866
CTCF G2GSE9613 20404314 20404982 668 12121
CTCF G2GSE9613 20411737 20412440 703 19561
Oct1 H2O2-HelaGSE14283 20409123 20409157 34 16613
Oct1 HelaGSE14283 20409122 20409161 39 16614
RARA MCF7GSE15244 20410345 20412517 2172 18904
RARG MCF7GSE15244 20409810 20412517 2707 18636
Sox2 hESGSE18292 20393633 20393787 154 1183
TFAP2C MCF7GSE21234 20394314 20394652 338 1956
TFAP2C MCF7GSE21234 20411564 20412527 963 19518
hScc1 BcellGSE12603 20394094 20394765 671 1902
hScc1 BcellGSE12603 20411737 20412404 667 19543
hScc1 CdLSGSE12603 20394129 20394693 564 1884
hScc1 CdLSGSE12603 20411627 20412440 813 19506
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
FOXA1 MCF7GSE15244 20386128 20386622 494 0
TAF k562GSE8489 20386735 20387748 1013 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
326 mRNA UBXD3 chr1 20257883 20265247 389 EST chr1 20256073 20258272 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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