AutismKB 2.0

Annotation Detail for COL4A3


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:COL4A3 ( - )
Gene Full Name: collagen, type IV, alpha 3 (Goodpasture antigen)
Band: 2q36.3
Quick LinksEntrez ID:1285; OMIM: 120070; Uniprot ID:CO4A3_HUMAN; ENSEMBL ID: ENSG00000169031; HGNC ID: 2204
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
253N-linked (GlcNAc...) (Potential).
793Cell attachment site (Potential).
998Cell attachment site (Potential).
1156Cell attachment site (Potential).
1308Cell attachment site (Potential).
1347Cell attachment site (Potential).
1434Cell attachment site (Potential).
1435Phosphoserine (By similarity).
1437Phosphoserine (By similarity).
Location(AA) Modifications Resource
253N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
1435Phosphoserine (By similarity).Swiss-Prot 53.0
1437Phosphoserine (By similarity).Swiss-Prot 53.0
Location(AA) Modification Resource
45O-linkedHMM predict
48O-linkedHMM predict
51O-linkedHMM predict
59Phosphoserine(CDC2)HMM predict
59Phosphoserine(CDK)HMM predict
59Phosphoserine(ATM)HMM predict
59PhosphoserineHMM predict
63O-linkedHMM predict
66O-linkedHMM predict
78O-linkedHMM predict
87O-linkedHMM predict
89O-linkedHMM predict
90O-linkedHMM predict
96O-linkedHMM predict
102O-linkedHMM predict
102O-linkedHMM predict
104O-linkedHMM predict
104Phosphoserine(CDK)HMM predict
110Phosphothreonine(CDC2)HMM predict
110Phosphothreonine(MAPK)HMM predict
114O-linkedHMM predict
128O-linkedHMM predict
129O-linkedHMM predict
153O-linkedHMM predict
156O-linkedHMM predict
170O-linkedHMM predict
215O-linkedHMM predict
226O-linkedHMM predict
232O-linkedHMM predict
235O-linkedHMM predict
253N-linkedHMM predict
261O-linkedHMM predict
264O-linkedHMM predict
276O-linkedHMM predict
276O-linkedHMM predict
287O-linkedHMM predict
314O-linkedHMM predict
329O-linkedHMM predict
332O-linkedHMM predict
346Phosphotyrosine(Syk)HMM predict
346SulfotyrosineHMM predict
347Phosphotyrosine(Syk)HMM predict
347SulfotyrosineHMM predict
358Phosphothreonine(CDC2)HMM predict
365MethylarginineHMM predict
374O-linkedHMM predict
374O-linkedHMM predict
382O-linkedHMM predict
382Phosphoserine(CDC2)HMM predict
382Phosphoserine(ATM)HMM predict
382Phosphoserine(IKK)HMM predict
385O-linkedHMM predict
387MethylarginineHMM predict
400O-linkedHMM predict
402O-linkedHMM predict
403O-linkedHMM predict
406MethylarginineHMM predict
419O-linkedHMM predict
431O-linkedHMM predict
431Phosphoserine(CDC2)HMM predict
431Phosphoserine(CDK)HMM predict
431Phosphoserine(ATM)HMM predict
459Phosphoserine(CDC2)HMM predict
469O-linkedHMM predict
481Phosphotyrosine(Jak)HMM predict
498O-linkedHMM predict
510O-linkedHMM predict
512O-linkedHMM predict
512Phosphoserine(CDC2)HMM predict
512Phosphoserine(CDK)HMM predict
515Phosphoserine(CDC2)HMM predict
515Phosphoserine(IKK)HMM predict
519O-linkedHMM predict
537O-linkedHMM predict
540O-linkedHMM predict
559MethylarginineHMM predict
565O-linkedHMM predict
577O-linkedHMM predict
583O-linkedHMM predict
592O-linkedHMM predict
603O-linkedHMM predict
603Phosphoserine(CDC2)HMM predict
603Phosphoserine(CDK)HMM predict
603Phosphoserine(ATM)HMM predict
603Phosphoserine(IKK)HMM predict
606O-linkedHMM predict
606Phosphoserine(CDC2)HMM predict
649O-linkedHMM predict
652O-linkedHMM predict
708O-linkedHMM predict
717O-linkedHMM predict
719O-linkedHMM predict
741O-linkedHMM predict
764O-linkedHMM predict
781Phosphothreonine(CDC2)HMM predict
781Phosphothreonine(MAPK)HMM predict
826O-linkedHMM predict
835O-linkedHMM predict
838O-linkedHMM predict
855O-linkedHMM predict
857O-linkedHMM predict
857Phosphoserine(CDC2)HMM predict
857Phosphoserine(ATM)HMM predict
873MethylarginineHMM predict
911Phosphothreonine(MAPK)HMM predict
911Phosphothreonine(CDK)HMM predict
915MethylarginineHMM predict
917O-linkedHMM predict
917Phosphoserine(CDC2)HMM predict
924O-linkedHMM predict
927MethylarginineHMM predict
929O-linkedHMM predict
929Phosphothreonine(MAPK)HMM predict
933O-linkedHMM predict
939O-linkedHMM predict
954O-linkedHMM predict
960O-linkedHMM predict
969O-linkedHMM predict
972MethylarginineHMM predict
981O-linkedHMM predict
984O-linkedHMM predict
1002O-linkedHMM predict
1011MethylarginineHMM predict
1025O-linkedHMM predict
1026O-linkedHMM predict
1029MethylarginineHMM predict
1031Phosphothreonine(PKA)HMM predict
1031Phosphothreonine(PKC)HMM predict
1037MethylarginineHMM predict
1053O-linkedHMM predict
1070O-linkedHMM predict
1070O-linkedHMM predict
1081O-linkedHMM predict
1082O-linkedHMM predict
1105O-linkedHMM predict
1105Phosphoserine(CDC2)HMM predict
1105Phosphoserine(CDK)HMM predict
1105Phosphoserine(ATM)HMM predict
1105Phosphoserine(IKK)HMM predict
1105PhosphoserineHMM predict
1108O-linkedHMM predict
1108Phosphoserine(CDK)HMM predict
1108Phosphoserine(IKK)HMM predict
1124O-linkedHMM predict
1127O-linkedHMM predict
1147O-linkedHMM predict
1147Phosphoserine(CDC2)HMM predict
1147Phosphoserine(ATM)HMM predict
1169O-linkedHMM predict
1172O-linkedHMM predict
1182MethylarginineHMM predict
1191O-linkedHMM predict
1194MethylarginineHMM predict
1206O-linkedHMM predict
1218O-linkedHMM predict
1238O-linkedHMM predict
1246O-linkedHMM predict
1246O-linkedHMM predict
1247MethylarginineHMM predict
1249O-linkedHMM predict
1249O-linkedHMM predict
1249Phosphoserine(CDC2)HMM predict
1270O-linkedHMM predict
1272O-linkedHMM predict
1279O-linkedHMM predict
1293MethylarginineHMM predict
1299Phosphothreonine(CDK)HMM predict
1318O-linkedHMM predict
1321O-linkedHMM predict
1329O-linkedHMM predict
1339O-linkedHMM predict
1359O-linkedHMM predict
1359Phosphoserine(CDC2)HMM predict
1359Phosphoserine(CDK)HMM predict
1359Phosphoserine(ATM)HMM predict
1359Phosphoserine(IKK)HMM predict
1365Phosphothreonine(CDC2)HMM predict
1365Phosphothreonine(CDK)HMM predict
1401Phosphothreonine(CDC2)HMM predict
1401Phosphothreonine(MAPK)HMM predict
1408O-linkedHMM predict
1411O-linkedHMM predict
1413O-linkedHMM predict
1414O-linkedHMM predict
1429O-linkedHMM predict
1431O-linkedHMM predict
1455O-linkedHMM predict
1519SulfotyrosineHMM predict
1565O-linkedHMM predict
1600Phosphoserine(MAPK)HMM predict
1603Phosphoserine(IKK)HMM predict
1626O-linkedHMM predict
1657LysineHMM predict
1658IsoleucineHMM predict
1662S-palmitoylHMM predict
1667LysineHMM predict
1668LysineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
15734 mRNA COL4A3 chr2 227854785 228005012 63 mRNA chr2 227935930 228015407Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018