AutismKB 2.0

Annotation Detail for TSHZ2


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:TSHZ2 ( C20orf17,DKFZp686K2480,FLJ33887,OVC10-2,TSH2,ZABC2,ZNF218 )
Gene Full Name: teashirt zinc finger homeobox 2
Band: 20q13.2
Quick LinksEntrez ID:128553; OMIM: NA; Uniprot ID:TSH2_HUMAN; ENSEMBL ID: ENSG00000182463,ENSG00000227164; HGNC ID: 13010
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
36Phosphoserine(CK1)HMM predict
38Phosphoserine(IKK)HMM predict
46N-linkedHMM predict
81N-linkedHMM predict
86Phosphoserine(ATM)HMM predict
86Phosphoserine(CK2)HMM predict
159N-linkedHMM predict
162N-linkedHMM predict
174Phosphoserine(CK1)HMM predict
187Phosphoserine(CAMK2)HMM predict
187Phosphoserine(IKK)HMM predict
235N-linkedHMM predict
311Phosphothreonine(PKC)HMM predict
313O-linkedHMM predict
318Phosphothreonine(MAPK)HMM predict
318Phosphothreonine(CDC2)HMM predict
332Phosphoserine(MAPK)HMM predict
335O-linkedHMM predict
339Phosphoserine(IKK)HMM predict
447Phosphoserine(IKK)HMM predict
449Phosphoserine(IKK)HMM predict
451Phosphoserine(CK2)HMM predict
454O-linkedHMM predict
458Phosphothreonine(CDK)HMM predict
473Phosphoserine(CK1)HMM predict
484SulfotyrosineHMM predict
484Phosphotyrosine(INSR)HMM predict
484Phosphotyrosine(Syk)HMM predict
484Phosphotyrosine(Jak)HMM predict
498Phosphotyrosine(Jak)HMM predict
570N-linkedHMM predict
573N-linkedHMM predict
625Phosphoserine(CK1)HMM predict
627Phosphoserine(CK1)HMM predict
639Phosphothreonine(MAPK)HMM predict
715O-linkedHMM predict
717Phosphoserine(IKK)HMM predict
717PhosphoserineHMM predict
719O-linkedHMM predict
720Phosphoserine(IKK)HMM predict
720Phosphoserine(CDC2)HMM predict
743Phosphoserine(CDC2)HMM predict
746O-linkedHMM predict
747Phosphothreonine(PKC)HMM predict
747O-linkedHMM predict
747O-linkedHMM predict
751Phosphoserine(CAMK2)HMM predict
770Phosphoserine(CDK)HMM predict
777Phosphoserine(CK2)HMM predict
778Phosphoserine(IKK)HMM predict
778Phosphoserine(ATM)HMM predict
782Phosphoserine(IKK)HMM predict
807Phosphothreonine(MAPK)HMM predict
807Phosphothreonine(CDC2)HMM predict
813O-linkedHMM predict
814O-linkedHMM predict
833Phosphoserine(CK1)HMM predict
999S-palmitoylHMM predict
1000S-palmitoylHMM predict
1018SerineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_173485
  • Location:chr20 51022352-51537217
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 51009106 51009313 207 13143
CTCF CD4SISSRdata 51009106 51009313 207 13143
p63 keratinocytesGSE17611 51015494 51016201 707 6505
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T0-glioblastomaGSE21026 51087870 51088348 478 0
CTCF CD4GSE12889 51258133 51258284 151 0
CTCF CD4GSE12889 51267030 51267409 379 0
CTCF CD4GSE12889 51463169 51463459 290 0
CTCF CD4SISSRdata 51258133 51258284 151 0
CTCF CD4SISSRdata 51267030 51267409 379 0
CTCF CD4SISSRdata 51463169 51463459 290 0
CTCF G2GSE9613 51023106 51023540 434 0
CTCF G2GSE9613 51034045 51034394 349 0
CTCF G2GSE9613 51207943 51208554 611 0
CTCF G2GSE9613 51266863 51267624 761 0
CTCF G2GSE9613 51431873 51432334 461 0
ER Breast-CancerGSE22609 51086940 51087360 420 0
ER MCF7GSE19013 51086914 51087404 490 0
ER MCF7GSE19013 51395926 51396567 641 0
FOXA1 MCF7GSE15244 51285617 51286478 861 0
FOXA1 MCF7GSE15244 51385817 51386305 488 0
FOXA1 MCF7GSE15244 51395018 51397054 2036 0
FOXA1 eGFPGSE10845 51285617 51286478 861 0
FOXA1 eGFPGSE10845 51385817 51386305 488 0
FOXA1 eGFPGSE10845 51395018 51397054 2036 0
Fos K562GSE19551 51192165 51192591 426 0
Fos K562GSE19551 51380774 51381985 1211 0
Fos K562GSE19551 51488291 51488768 477 0
FoxA1 MCF7MACSdata 51308645 51309103 458 0
FoxA1 MCF7MACSdata 51532169 51532374 205 0
Gata1 K562GSE18868 51225362 51225965 603 0
Gata2 K562GSE18868 51225190 51225914 724 0
Myc K562GSE19551 51225301 51225952 651 0
Myc K562GSE19551 51267139 51267420 281 0
Nanog ESGSE20650 51365927 51366525 598 0
Nanog ESGSE20650 51523046 51523174 128 0
Nanog hESGSE18292 51268983 51269469 486 0
Nanog hESGSE18292 51366069 51366340 271 0
P300 T30-glioblastomaGSE21026 51381113 51382032 919 0
RARA MCF7GSE15244 51127379 51128156 777 0
RARA MCF7GSE15244 51380265 51382533 2268 0
RARA MCF7GSE15244 51394823 51397054 2231 0
Rb GrowingGSE19898 51106547 51106687 140 0
TFAP2C MCF7GSE21234 51096034 51096512 478 0
TFAP2C MCF7GSE21234 51124807 51125235 428 0
TFAP2C MCF7GSE21234 51381247 51382034 787 0
TFAP2C MCF7GSE21234 51395380 51396721 1341 0
USF1 HepG2E 51462006 51462912 906 0
hScc1 BcellGSE12603 51266863 51267588 725 0
hScc1 BcellGSE12603 51305157 51305829 672 0
hScc1 CdLSGSE12603 51266828 51267624 796 0
hScc1 G2GSE9613 51266890 51267475 585 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
16537 mRNA C20orf17 chr20 51538901 51539571 670 mRNA chr20 51447605 51554267 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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