AutismKB 2.0

Annotation Detail for TMEM18


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Basic Information Top
Gene Symbol:TMEM18 ( DKFZp434C1714 )
Gene Full Name: transmembrane protein 18
Band: 2p25.3
Quick LinksEntrez ID:129787; OMIM: 613220; Uniprot ID:TMM18_HUMAN; ENSEMBL ID: ENSG00000151353; HGNC ID: 25257
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
138Nuclear localization signal.
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_152834
  • Location:chr2 657974-667438
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 670235 670527 292 2943
CTCF G2GSE9613 678481 678771 290 11188
CTCF G2GSE9613 681808 682101 293 14516
PHF8 293TGSE20725 667033 667882 849 19
PHF8 HeLaGSE20725 667063 667952 889 69
PHF8 Hs68minusFBSGSE20725 666863 668031 1168 9
PHF8 Hs68plusFBSGSE20725 666897 668030 1133 25
TAF HelaGSE8489 668050 668382 332 778
TAF k562GSE8489 667891 668382 491 698
TAF k562GSE8489 668728 669015 287 1433
TFAP2C MCF7GSE21234 670415 670815 400 3177
p130 QuiescentGSE19898 667151 667749 598 12
p130 SenescentGSE19898 667002 668081 1079 103
p130 shRbQuiescentGSE19898 667095 667956 861 87
p130 shRbSenescentGSE19898 667121 668028 907 136
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 638668 639636 968 18823
CTCF G2GSE9613 650798 651517 719 6817
CTCF G2GSE9613 652547 652859 312 5272
CTCF G2GSE9613 655219 656705 1486 2013
c MYCMCF7 655089 656033 944 2414
hScc1 BcellGSE12603 651005 651585 580 6680
hScc1 BcellGSE12603 655855 656228 373 1933
hScc1 G2GSE9613 652511 652859 348 5290
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 661581 662664 1083 0
CTCF G2GSE9613 665529 665738 209 0
CTCF G2GSE9613 666295 667672 1377 0
ETS1 JurkatGSE17954 666318 668043 1725 0
H3K4me3 colorectalcancer 665883 666034 151 0
H3ac HepG2E 665659 666559 900 0
HIF1 HypoHepG2 666177 667559 1382 0
Rb GrowingGSE19898 666262 666401 139 0
Rb GrowingGSE19898 667139 667636 497 0
Rb QuiescentGSE19898 665934 666210 276 0
Rb QuiescentGSE19898 667154 667520 366 0
Rb SenescentGSE19898 666444 667897 1453 0
Rb shRbQuiescentGSE19898 667073 667605 532 0
Rb shRbSenescenceGSE19898 667079 667553 474 0
hScc1 BcellGSE12603 666222 667744 1522 0
p130 SenescentGSE19898 666016 666229 213 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
13812 HTC chr2 667185 672802 151 mRNA TMEM18 chr2 657974 667439Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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