AutismKB 2.0

Annotation Detail for COL11A1


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Basic Information Top
Gene Symbol:COL11A1 ( CO11A1,COLL6,STL2 )
Gene Full Name: collagen, type XI, alpha 1
Band: 1p21.1
Quick LinksEntrez ID:1301; OMIM: 120280; Uniprot ID:COBA1_HUMAN; ENSEMBL ID: ENSG00000060718; HGNC ID: 2186
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
612Allysine.
1452Allysine.
1640N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
612Allysine.Swiss-Prot 53.0
1452Allysine.Swiss-Prot 53.0
1640N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
10Phosphothreonine(PKC)HMM predict
50PhosphoserineHMM predict
67Phosphoserine(PKG)HMM predict
134Phosphoserine(CDC2)HMM predict
177Phosphothreonine(PKA)HMM predict
187Phosphothreonine(PKA)HMM predict
269SulfotyrosineHMM predict
271SulfotyrosineHMM predict
273SulfotyrosineHMM predict
278Phosphotyrosine(EGFR)HMM predict
278Phosphotyrosine(SRC)HMM predict
278Phosphotyrosine(Syk)HMM predict
283Phosphoserine(CK1)HMM predict
285O-linkedHMM predict
311Phosphotyrosine(INSR)HMM predict
311SulfotyrosineHMM predict
319Phosphothreonine(PKC)HMM predict
326Phosphoserine(PKG)HMM predict
326Phosphoserine(PKB)HMM predict
348Phosphotyrosine(INSR)HMM predict
350Phosphoserine(ATM)HMM predict
355Phosphoserine(PKA)HMM predict
355Phosphoserine(PKG)HMM predict
360Phosphotyrosine(INSR)HMM predict
381SulfotyrosineHMM predict
384SulfotyrosineHMM predict
386SulfotyrosineHMM predict
389Phosphotyrosine(Syk)HMM predict
389SulfotyrosineHMM predict
394O-linkedHMM predict
395Phosphoserine(CDC2)HMM predict
395Phosphoserine(MAPK)HMM predict
425O-linkedHMM predict
428O-linkedHMM predict
462O-linkedHMM predict
462O-linkedHMM predict
476MethylarginineHMM predict
537O-linkedHMM predict
552O-linkedHMM predict
555O-linkedHMM predict
564MethylarginineHMM predict
573O-linkedHMM predict
573O-linkedHMM predict
579MethylarginineHMM predict
581MethylarginineHMM predict
597O-linkedHMM predict
600MethylarginineHMM predict
612O-linkedHMM predict
615MethylarginineHMM predict
651MethylarginineHMM predict
678O-linkedHMM predict
714O-linkedHMM predict
741O-linkedHMM predict
744O-linkedHMM predict
765O-linkedHMM predict
774O-linkedHMM predict
776O-linkedHMM predict
777O-linkedHMM predict
780O-linkedHMM predict
789O-linkedHMM predict
795O-linkedHMM predict
807MethylarginineHMM predict
816O-linkedHMM predict
818MethylarginineHMM predict
822O-linkedHMM predict
822O-linkedHMM predict
828O-linkedHMM predict
828O-linkedHMM predict
834O-linkedHMM predict
848MethylarginineHMM predict
852O-linkedHMM predict
854O-linkedHMM predict
855O-linkedHMM predict
867O-linkedHMM predict
885O-linkedHMM predict
891MethylarginineHMM predict
897O-linkedHMM predict
903O-linkedHMM predict
905O-linkedHMM predict
906O-linkedHMM predict
933O-linkedHMM predict
951MethylarginineHMM predict
954O-linkedHMM predict
975O-linkedHMM predict
978O-linkedHMM predict
984MethylarginineHMM predict
1008O-linkedHMM predict
1017O-linkedHMM predict
1044O-linkedHMM predict
1058Phosphoserine(CDC2)HMM predict
1064O-linkedHMM predict
1074MethylarginineHMM predict
1089O-linkedHMM predict
1095O-linkedHMM predict
1121Phosphoserine(ATM)HMM predict
1128O-linkedHMM predict
1137O-linkedHMM predict
1139O-linkedHMM predict
1140O-linkedHMM predict
1143O-linkedHMM predict
1173MethylarginineHMM predict
1182O-linkedHMM predict
1209O-linkedHMM predict
1227MethylarginineHMM predict
1244O-linkedHMM predict
1254O-linkedHMM predict
1275O-linkedHMM predict
1281O-linkedHMM predict
1296O-linkedHMM predict
1305O-linkedHMM predict
1335O-linkedHMM predict
1350O-linkedHMM predict
1350O-linkedHMM predict
1377O-linkedHMM predict
1380O-linkedHMM predict
1392O-linkedHMM predict
1410MethylarginineHMM predict
1443O-linkedHMM predict
1448O-linkedHMM predict
1449O-linkedHMM predict
1452O-linkedHMM predict
1470O-linkedHMM predict
1473MethylarginineHMM predict
1485O-linkedHMM predict
1512O-linkedHMM predict
1515O-linkedHMM predict
1517O-linkedHMM predict
1517O-linkedHMM predict
1524O-linkedHMM predict
1527O-linkedHMM predict
1554Phosphothreonine(PKC)HMM predict
1558Phosphothreonine(PKA)HMM predict
1572SulfotyrosineHMM predict
1640N-linkedHMM predict
1650SulfotyrosineHMM predict
1709N-linkedHMM predict
1763Phosphotyrosine(INSR)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001854
  • Location:chr1 103114611-103346639
  • strand:-
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 H2O2-HelaGSE14283 103110970 103111023 53 3615
Oct1 HelaGSE14283 103110973 103111023 50 3614
RARA MCF7GSE15244 103103907 103104419 512 10449
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
FoxA1 MCF7MACSdata 103135688 103135851 163 0
FoxA1 MCF7MACSdata 103179357 103179744 387 0
Oct1 H2O2-HelaGSE14283 103181572 103181606 34 0
Oct1 H2O2-HelaGSE14283 103251413 103251446 33 0
Oct1 HelaGSE14283 103181569 103181607 38 0
Oct1 HelaGSE14283 103251412 103251445 33 0
P300 T30-glioblastomaGSE21026 103117599 103118428 829 0
RARA MCF7GSE15244 103179415 103180105 690 0
hScc1 CdLSGSE12603 103208590 103208844 254 0
hScc1 G2GSE9613 103208590 103208844 254 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
1199 EST chr1 103055317 103055759 299 mRNA COL11A1 chr1 103055015 103286073Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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