AutismKB 2.0

Annotation Detail for TMEM198


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Basic Information Top
Gene Symbol:TMEM198 ( FLJ41180,MGC99813 )
Gene Full Name: transmembrane protein 198
Band: 2q35
Quick LinksEntrez ID:130612; OMIM: NA; Uniprot ID:TM198_HUMAN; ENSEMBL ID: ENSG00000188760; HGNC ID: 33704
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001005209
  • Location:chr2 220116988-220123558
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
p130 QuiescentGSE19898 220116862 220117053 191 31
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 220133417 220133635 218 9968
CTCF CD4SISSRdata 220133417 220133635 218 9968
CTCF G2GSE9613 220124072 220124479 407 717
CTCF G2GSE9613 220125305 220126135 830 2162
CTCF G2GSE9613 220126473 220126668 195 3012
CTCF G2GSE9613 220127130 220127605 475 3809
CTCF G2GSE9613 220130178 220131516 1338 7289
CTCF G2GSE9613 220132156 220132432 276 8736
CTCF G2GSE9613 220133209 220133438 229 9765
CTCF G2GSE9613 220133802 220134500 698 10593
Myc hESGSE17917 220125986 220126207 221 2538
hScc1 BcellGSE12603 220129389 220129901 512 6087
hScc1 BcellGSE12603 220130978 220131405 427 7633
hScc1 G2GSE9613 220133977 220134500 523 10680
p130 SenescentGSE19898 220133871 220134124 253 10439
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 220120671 220121129 458 0
CTCF G2GSE9613 220123075 220123504 429 0
H3ac HepG2E 220117248 220117980 732 0
NRSF JurkatGSE13047 220116614 220117505 891 0
NRSF mAbJurkat 220117130 220119706 2576 0
NRSF mAbJurkat 220120018 220120411 393 0
NRSF-mono JurkatQuESTdata 220116407 220117885 1478 0
NRSF-poly JurkatQuESTdata 220116297 220117914 1617 0
TAF HelaGSE8489 220119276 220119706 430 0
hScc1 BcellGSE12603 220117014 220117508 494 0
hScc1 BcellGSE12603 220120483 220121054 571 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
15690 mRNA MGC99813 chr2 220233889 220240806 54 mRNA CHPF chr2 220229182 220233943Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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