AutismKB 2.0

Annotation Detail for FAM43A


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Basic Information Top
Gene Symbol:FAM43A ( FLJ90022 )
Gene Full Name: family with sequence similarity 43, member A
Band: 3q29
Quick LinksEntrez ID:131583; OMIM: NA; Uniprot ID:FA43A_HUMAN; ENSEMBL ID: ENSG00000185112; HGNC ID: 26888
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
21PhosphoserineHMM predict
21Phosphoserine(PKB)HMM predict
21Phosphoserine(PKG)HMM predict
70Phosphotyrosine(SRC)HMM predict
70Phosphotyrosine(INSR)HMM predict
77N-linkedHMM predict
107Phosphothreonine(PKC)HMM predict
235S-palmitoylHMM predict
236S-palmitoylHMM predict
246PhosphoserineHMM predict
246Phosphoserine(PKA)HMM predict
354Phosphoserine(ATM)HMM predict
389Phosphoserine(CK2)HMM predict
389Phosphoserine(CK1)HMM predict
392Phosphoserine(CK1)HMM predict
402O-linkedHMM predict
404O-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_153690
  • Location:chr3 195887910-195891052
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 195884476 195885036 560 3155
CTCF CD4SISSRdata 195884476 195885036 560 3155
CTCF G2GSE9613 195881086 195881619 533 6558
CTCF G2GSE9613 195882887 195883240 353 4847
CTCF G2GSE9613 195884304 195885268 964 3125
NFkBII GM10847GSE19485 195887263 195888551 1288 4
RARA MCF7GSE15244 195884377 195885683 1306 2881
RARG MCF7GSE15244 195884484 195885301 817 3018
hScc1 BcellGSE12603 195884582 195885268 686 2986
hScc1 CdLSGSE12603 195884484 195885441 957 2948
hScc1 G2GSE9613 195884377 195885268 891 3088
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 195891511 195891766 255 586
CTCF G2GSE9613 195895075 195895216 141 4093
CTCF G2GSE9613 195897572 195897934 362 6701
CTCF G2GSE9613 195898477 195899352 875 7862
CTCF G2GSE9613 195905117 195905468 351 14240
CTCF G2GSE9613 195908460 195908756 296 17556
RARA MCF7GSE15244 195894000 195894293 293 3094
Rb QuiescentGSE19898 195891580 195891773 193 624
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 195887659 195888255 596 0
CTCF G2GSE9613 195888895 195890288 1393 0
H3K4me3 colorectalcancer 195887919 195888081 162 0
Pol2 GM12878GSE19551 195887759 195888220 461 0
hScc1 BcellGSE12603 195887659 195888383 724 0
hScc1 BcellGSE12603 195888926 195890233 1307 0
hScc1 CdLSGSE12603 195887693 195888186 493 0
hScc1 CdLSGSE12603 195888565 195890515 1950 0
hScc1 G2GSE9613 195887737 195889151 1414 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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