Annotation Detail for LIN54
Basic Information Top
| Gene Symbol: | LIN54 ( CXCDC1,DKFZp686L1814,JC8.6,MGC129905,MIP120 ) |
|---|---|
| Gene Full Name: | lin-54 homolog (C. elegans) |
| Band: | 4q21.22 |
| Quick Links | Entrez ID:132660; OMIM: 613367; Uniprot ID:LIN54_HUMAN; ENSEMBL ID: ENSG00000189308; HGNC ID: 25397 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 244 | N6-acetyllysine. | |
| 249 | N6-acetyllysine. | |
| 282 | Phosphoserine. | |
| 310 | Phosphoserine. | |
| 314 | Phosphoserine. | |
| 357 | N6-acetyllysine. | |
| Location(AA) | Modifications | Resource |
|---|
| No data |
- RefSeq ID: NM_194282
- Location:chr4 84065151-84151005
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 84150917 | 84151362 | 445 | 134 |
| CTCF | G2 | GSE9613 | 84152507 | 84153422 | 915 | 1959 |
| H3K4me2 | HCT116 | GSE10453 | 84151890 | 84152371 | 481 | 1125 |
| H3K4me3 | colorectal | cancer | 84151250 | 84152507 | 1257 | 873 |
| H3ac | HepG2 | E | 84151918 | 84152436 | 518 | 1172 |
| H3ac | HepG2 | E | 84153770 | 84154450 | 680 | 3105 |
| LIN9 | S | GSE7516 | 84150747 | 84151502 | 755 | 119 |
| Oct1 | Hela | GSE14283 | 84160749 | 84160811 | 62 | 9775 |
| Oct1 | Hela | GSE14283 | 84161067 | 84161098 | 31 | 10077 |
| P300 | T30-glioblastoma | GSE21026 | 84152911 | 84153781 | 870 | 2341 |
| TAF | Hela | GSE8489 | 84153422 | 84154560 | 1138 | 2986 |
| USF1 | HepG2 | E | 84153272 | 84154355 | 1083 | 2808 |
| USF2 | HepG2 | E | 84153466 | 84154355 | 889 | 2905 |
| hScc1 | Bcell | GSE12603 | 84152300 | 84153466 | 1166 | 1878 |
| hScc1 | G2 | GSE9613 | 84152471 | 84153422 | 951 | 1941 |
| p130 | Quiescent | GSE19898 | 84151033 | 84151281 | 248 | 152 |
| p130 | Quiescent | GSE19898 | 84152926 | 84153502 | 576 | 2209 |
| p130 | Senescent | GSE19898 | 84152986 | 84153610 | 624 | 2293 |
| p130 | shRbSenescent | GSE19898 | 84150617 | 84151634 | 1017 | 120 |
| p130 | shRbSenescent | GSE19898 | 84152627 | 84153512 | 885 | 2064 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CBP | T0-glioblastoma | GSE21026 | 84062725 | 84063147 | 422 | 2216 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ER | E2-MCF7 | GSE14664 | 84143364 | 84143401 | 37 | 0 |
| H3ac | HepG2 | E | 84150038 | 84150686 | 648 | 0 |
| LIN9 | G0 | GSE7516 | 84150290 | 84151574 | 1284 | 0 |
| Oct1 | Hela | GSE14283 | 84087255 | 84087311 | 56 | 0 |
| Oct1 | Hela | GSE14283 | 84103529 | 84103562 | 33 | 0 |
| p130 | Senescent | GSE19898 | 84150537 | 84151325 | 788 | 0 |
| p130 | shRbQuiescent | GSE19898 | 84150316 | 84151347 | 1031 | 0 |
Validated miRNA targets