Annotation Detail for GNPDA2
Basic Information Top
| Gene Symbol: | GNPDA2 ( GNP2,SB52 ) |
|---|---|
| Gene Full Name: | glucosamine-6-phosphate deaminase 2 |
| Band: | 4p12 |
| Quick Links | Entrez ID:132789; OMIM: 613222; Uniprot ID:GNPI2_HUMAN; ENSEMBL ID: ENSG00000163281; HGNC ID: 21526 |
| Relate to Another Database: | SFARIGene; denovo-db |
Post Translation Modification- RefSeq ID: NM_138335
- Location:chr4 44398925-44423368
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 44435508 | 44435687 | 179 | 12229 |
| CTCF | CD4 | SISSRdata | 44435508 | 44435687 | 179 | 12229 |
| H3K4me3 | colorectal | cancer | 44423399 | 44424000 | 601 | 331 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 44422818 | 44423435 | 617 | 0 |
| H3K4me3 | colorectal | cancer | 44422313 | 44422777 | 464 | 0 |
| H3ac | HepG2 | E | 44422276 | 44422917 | 641 | 0 |
| Oct1 | Hela | GSE14283 | 44412550 | 44412634 | 84 | 0 |
| Micro RNA Name | Stem Loop Name | The chromosome that miRNA located | Publication |
|---|---|---|---|
| hsa-miR-1 | hsa-mir-1-2 | 18 | 15685193 |
| hsa-miR-1 | hsa-mir-1-1 | 20 | 15685193 |
| hsa-miR-124 | hsa-mir-124-1 | 8 | 15685193 |
| hsa-miR-124 | hsa-mir-124-2 | 8 | 15685193 |
| hsa-miR-124 | hsa-mir-124-3 | 20 | 15685193 |
| hsa-miR-373 | hsa-mir-373 | 19 | 15685193 |
| hsa-miR-373* | hsa-mir-373 | 19 | 15685193 |
| ID in Tarbase | Data Type | Support Type | miRNA | Gene | Direct Support | Publication |
|---|---|---|---|---|---|---|
| 122 | Unknown | MicroArray | miR-1 | GNPDA2 | n_a | 15685193 |
| Ensembl | Protein Type | Differentially expressed in | Pathology or Event | Mis Regulation | Gene Expression | Tumour Involvement |
| ENSG00000163281 | "cardiac and skeletal muscles, cardiogenesis" | n_a | n_a | "lymphocyte, muscle cell" | "benign tumour, malignant tumour, carcinoma, sarcoma" |