Annotation Detail for C5orf33

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Basic Information Top

Gene Symbol:	C5orf33 ( FLJ30596,MGC43298 )
Gene Full Name:	chromosome 5 open reading frame 33
Band:	5p13.2
Quick Links	Entrez ID:133686; OMIM: NA; Uniprot ID:CE033_HUMAN; ENSEMBL ID: ENSG00000152620; HGNC ID:
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:1 results
Experimental PTM Sites from dbPTM:0 results
Predicted PTM Sites by profile HMM from dbPTM:0 results

Location(AA)	Modification
188	Phosphoserine (By similarity).

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_153013
Location:chr5 36229573-36278000
strand:-

Upstream the gene:7 results
Downstream the gene:0 results
Inside the gene:15 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
Fos	K562	GSE19551	36277688	36278371	683	29
LIN9	S	GSE7516	36277696	36279164	1468	430
TFAP2C	MCF7	GSE21234	36277693	36278354	661	23
p130	Quiescent	GSE19898	36277683	36278507	824	95
p130	Senescent	GSE19898	36277608	36278406	798	7
p130	shRbQuiescent	GSE19898	36277671	36278599	928	135
p130	shRbSenescent	GSE19898	36277688	36278470	782	79

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	CD4	GSE12889	36250439	36250586	147	0
CTCF	CD4	SISSRdata	36250439	36250586	147	0
CTCF	G2	GSE9613	36276803	36278469	1666	0
H3K4me2	HCT116	GSE10453	36275561	36276372	811	0
H3ac	HepG2	E	36275210	36277169	1959	0
Oct1	H2O2-Hela	GSE14283	36247759	36247788	29	0
Oct1	Hela	GSE14283	36233495	36233528	33	0
Oct1	Hela	GSE14283	36247759	36247788	29	0
PHF8	HeLa	GSE20725	36275833	36278765	2932	0
Rb	Senescent	GSE19898	36276748	36276958	210	0
Rb	Senescent	GSE19898	36277325	36277496	171	0
TAF	Hela	GSE8489	36275138	36276228	1090	0
hScc1	Bcell	GSE12603	36276958	36278258	1300	0
hScc1	CdLS	GSE12603	36277737	36278258	521	0
hScc1	G2	GSE9613	36276803	36278258	1455	0

Validated miRNA targets

Cis-Nats regulation

Cluster ID	Plue Type	Plus Gene Name	Plus Chromosome	Plus Start	Plus End	Overlap Length	Minus Type	Minus Gene Name	Minus Chromosome	Minus Star	Minus End	Type
20849	EST		chr5	36235933	36236340	54	mRNA	FLJ30596	chr5	36229573	36278001	Sense/Antisense (SA) pairs

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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