Annotation Detail for CCDC127
Basic Information Top
| Gene Symbol: | CCDC127 ( FLJ25701 ) |
|---|---|
| Gene Full Name: | coiled-coil domain containing 127 |
| Band: | 5p15.33 |
| Quick Links | Entrez ID:133957; OMIM: NA; Uniprot ID:CC127_HUMAN; ENSEMBL ID: ENSG00000164366; HGNC ID: 30520 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 59 | Phosphotyrosine(Jak) | HMM predict |
| 63 | Phosphothreonine(PKA) | HMM predict |
| 97 | N-linked | HMM predict |
| 108 | Phosphoserine(ATM) | HMM predict |
- RefSeq ID: NM_145265
- Location:chr5 257874-271296
- strand:-
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 251496 | 252081 | 585 | 6086 |
| CTCF | G2 | GSE9613 | 252371 | 253425 | 1054 | 4977 |
| CTCF | G2 | GSE9613 | 253889 | 254340 | 451 | 3760 |
| hScc1 | Bcell | GSE12603 | 253854 | 254273 | 419 | 3811 |
| hScc1 | Bcell | GSE12603 | 256381 | 256599 | 218 | 1385 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 262247 | 262781 | 534 | 0 |
| CTCF | G2 | GSE9613 | 264439 | 265185 | 746 | 0 |
| CTCF | G2 | GSE9613 | 268534 | 269086 | 552 | 0 |
| H3ac | HepG2 | E | 270018 | 270713 | 695 | 0 |
| HIF1 | Norm | HepG2 | 270998 | 271495 | 497 | 0 |
| NRSF | pAb | Jurkat | 262190 | 262781 | 591 | 0 |
| Oct4 | hES | GSE17917 | 260641 | 260961 | 320 | 0 |
| PHF8 | Hs68plusFBS | GSE20725 | 270825 | 271709 | 884 | 0 |
| Rb | shRbSenescence | GSE19898 | 271167 | 271382 | 215 | 0 |
| TAF | Hela | GSE8489 | 262190 | 262781 | 591 | 0 |
| hScc1 | Bcell | GSE12603 | 262429 | 262781 | 352 | 0 |
| hScc1 | Bcell | GSE12603 | 264075 | 266708 | 2633 | 0 |
| hScc1 | Bcell | GSE12603 | 268596 | 269121 | 525 | 0 |
| hScc1 | Bcell | GSE12603 | 271123 | 271459 | 336 | 0 |
| hScc1 | CdLS | GSE12603 | 268567 | 269144 | 577 | 0 |
| hScc1 | CdLS | GSE12603 | 270713 | 271852 | 1139 | 0 |
| hScc1 | G2 | GSE9613 | 268596 | 269086 | 490 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20594 | EST | chr5 | 269562 | 270281 | 131 | mRNA | LOC133957 | chr5 | 257874 | 271297 | Sense/Antisense (SA) pairs | |