Annotation Detail for FAM173B

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Basic Information Top

Gene Symbol:	FAM173B ( FLJ20667 )
Gene Full Name:	family with sequence similarity 173, member B
Band:	5p15.2
Quick Links	Entrez ID:134145; OMIM: NA; Uniprot ID:F173B_HUMAN; ENSEMBL ID: ENSG00000150756; HGNC ID: 27029
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_199133
Location:chr5 10279444-10302988
strand:-

Upstream the gene:2 results
Downstream the gene:0 results
Inside the gene:17 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
TAF	Hela	GSE8489	10302704	10303559	855	143
p130	Senescent	GSE19898	10302531	10303636	1105	95

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	G2	GSE9613	10286127	10287015	888	0
CTCF	G2	GSE9613	10302704	10302984	280	0
H3ac	HepG2	E	10301086	10302061	975	0
Myc	K562	GSE19551	10286663	10287014	351	0
P300	T30-glioblastoma	GSE21026	10286281	10287181	900	0
PHF8	HeLa	GSE20725	10301289	10304398	3109	0
Rb	Growing	GSE19898	10302609	10302935	326	0
Rb	Quiescent	GSE19898	10302768	10303132	364	0
Rb	Senescent	GSE19898	10302416	10303015	599	0
Rb	shRbSenescence	GSE19898	10302806	10303038	232	0
TAF	Hela	GSE8489	10299782	10300152	370	0
TAF	Hela	GSE8489	10300729	10302061	1332	0
hScc1	Bcell	GSE12603	10302704	10302952	248	0
hScc1	G2	GSE9613	10286090	10287015	925	0
p130	Quiescent	GSE19898	10302628	10303306	678	0
p130	shRbQuiescent	GSE19898	10302286	10302902	616	0
p130	shRbSenescent	GSE19898	10302498	10303017	519	0

Validated miRNA targets

Cis-Nats regulation

Cluster ID	Plue Type	Plus Gene Name	Plus Chromosome	Plus Start	Plus End	Overlap Length	Minus Type	Minus Gene Name	Minus Chromosome	Minus Star	Minus End	Type
20696	EST		chr5	10301436	10303027	20	mRNA	LOC134145	chr5	10279444	10302989	Sense/Antisense (SA) pairs

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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