AutismKB 2.0

Annotation Detail for CPT2


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Basic Information Top
Gene Symbol:CPT2 ( CPT1,CPTASE )
Gene Full Name: carnitine palmitoyltransferase 2
Band: 1p32.3
Quick LinksEntrez ID:1376; OMIM: 600650; Uniprot ID:CPT2_HUMAN; ENSEMBL ID: ENSG00000157184; HGNC ID: 2330
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
510N6-acetyllysine.
544N6-acetyllysine.
Location(AA) Modifications Resource
544N6-acetyllysine (By similarity).Swiss-Prot 53.0
Location(AA) Modification Resource
38PhosphoserineHMM predict
66Phosphoserine(PKG)HMM predict
113Phosphoserine(ATM)HMM predict
126Phosphoserine(IKK)HMM predict
145Phosphotyrosine(Syk)HMM predict
154N-linkedHMM predict
222N-linkedHMM predict
278Phosphoserine(ATM)HMM predict
309Phosphoserine(ATM)HMM predict
394O-linkedHMM predict
394Phosphothreonine(MAPK)HMM predict
398Phosphothreonine(CDK)HMM predict
398Phosphothreonine(MAPK)HMM predict
398O-linkedHMM predict
405O-linkedHMM predict
406O-linkedHMM predict
462Phosphoserine(CDC2)HMM predict
485O-linkedHMM predict
574Phosphotyrosine(Syk)HMM predict
594Phosphoserine(CDK)HMM predict
594Phosphoserine(CDC2)HMM predict
614Phosphotyrosine(Abl)HMM predict
624N-linkedHMM predict
640ValineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_000098
  • Location:chr1 53434688-53452454
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 53420355 53420637 282 14193
CTCF CD4SISSRdata 53420355 53420637 282 14193
CTCF G2GSE9613 53420368 53421102 734 13954
CTCF G2GSE9613 53424476 53424691 215 10105
FOXA1 MCF7GSE15244 53414786 53415945 1159 19323
FoxA1 MCF7MACSdata 53421819 53421971 152 12794
GABP k562GSE8489 53433657 53434596 939 562
USF1 HepG2E 53420566 53423265 2699 12773
USF2 HepG2E 53420566 53422258 1692 13277
p130 shRbQuiescentGSE19898 53418635 53419378 743 15682
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 53451652 53451831 179 0
GABP k562GSE8489 53436078 53436857 779 0
H3K4me2 HCT116GSE10453 53435566 53436674 1108 0
H3K4me3 colorectalcancer 53435296 53436540 1244 0
H3ac HepG2E 53435417 53436904 1487 0
PHF8 293TGSE20725 53434696 53435481 785 0
PHF8 HeLaGSE20725 53434379 53435712 1333 0
PHF8 Hs68plusFBSGSE20725 53434546 53435948 1402 0
Pol2 GM12878GSE19551 53434738 53436308 1570 0
Rb QuiescentGSE19898 53434803 53435042 239 0
Rb SenescentGSE19898 53434687 53435167 480 0
TFAP2C MCF7GSE21234 53434978 53435217 239 0
hScc1 BcellGSE12603 53435017 53435417 400 0
hScc1 BcellGSE12603 53435842 53436007 165 0
p130 QuiescentGSE19898 53434819 53435210 391 0
p130 QuiescentGSE19898 53435315 53435464 149 0
p130 SenescentGSE19898 53434655 53435195 540 0
p130 shRbSenescentGSE19898 53434687 53435180 493 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
801 mRNA CPT2 chr1 53374121 53391888 94 mRNA FLJ20580 chr1 53391794 53398310Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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