AutismKB 2.0

Annotation Detail for SGCZ


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Basic Information Top
Gene Symbol:SGCZ ( MGC149397,ZSG1 )
Gene Full Name: sarcoglycan, zeta
Band: 8p22
Quick LinksEntrez ID:137868; OMIM: 608113; Uniprot ID:SGCZ_HUMAN; ENSEMBL ID: ENSG00000185053; HGNC ID: 14075
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
62N-linked (GlcNAc...) (Potential).
110N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
62N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
110N-linked (GlcNAc...) (Potential).Swiss-Prot 53.0
Location(AA) Modification Resource
62N-linkedHMM predict
101Phosphoserine(CDC2)HMM predict
110N-linkedHMM predict
114N-linkedHMM predict
145Phosphoserine(CK2)HMM predict
197Phosphoserine(CDC2)HMM predict
201Phosphoserine(PKA)HMM predict
257Phosphoserine(IKK)HMM predict
257Phosphoserine(CDC2)HMM predict
261Phosphoserine(CK1)HMM predict
262Phosphoserine(CK1)HMM predict
266Phosphothreonine(PKC)HMM predict
279Phosphotyrosine(INSR)HMM predict
281Phosphoserine(CDC2)HMM predict
292O-linkedHMM predict
296S-farnesylHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_139167
  • Location:chr8 13991744-15140162
  • strand:-
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 H2O2-HelaGSE14283 13991602 13991632 30 128
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T0-glioblastomaGSE21026 14124510 14124715 205 0
CTCF G2GSE9613 14551881 14552207 326 0
CTCF G2GSE9613 14719530 14720057 527 0
CTCF G2GSE9613 15138619 15139464 845 0
ER E2-MCF7GSE14664 14049571 14049608 37 0
ER E2-MCF7GSE14664 14248096 14248129 33 0
ER E2-MCF7GSE14664 14534796 14534878 82 0
ER E2-MCF7GSE14664 14882977 14883023 46 0
ER E2-MCF7GSE14664 14938943 14938979 36 0
ER Fulvestrant-MCF7GSE14664 14049572 14049614 42 0
ER Fulvestrant-MCF7GSE14664 14061304 14061336 32 0
ER Fulvestrant-MCF7GSE14664 14248096 14248185 89 0
ER Fulvestrant-MCF7GSE14664 14882989 14883022 33 0
FOXA1 DLD1GSE12801 14473242 14473596 354 0
FOXA1 DLD1GSE12801 14752291 14752489 198 0
FoxA1 MCF7MACSdata 14803141 14803266 125 0
GABP HelaGSE8489 14276953 14277379 426 0
GABP HelaGSE8489 14930017 14930587 570 0
GATA3 MCF7GSE15244 14757383 14757800 417 0
KLF4 hESGSE17917 15064568 15064763 195 0
KLF4 hESGSE17917 15138603 15138948 345 0
Myc K562GSE19551 14706209 14706392 183 0
NRSF pAbJurkat 15138577 15138745 168 0
Nanog ESGSE20650 14390159 14390731 572 0
Nanog ESGSE20650 14458976 14459789 813 0
Nanog ESGSE20650 14704599 14704951 352 0
Nanog hESGSE18292 14389927 14390706 779 0
Nanog hESGSE18292 14401731 14402245 514 0
Oct1 H2O2-HelaGSE14283 14048266 14048298 32 0
Oct1 H2O2-HelaGSE14283 14049576 14049611 35 0
Oct1 H2O2-HelaGSE14283 14061301 14061328 27 0
Oct1 H2O2-HelaGSE14283 14351203 14351232 29 0
Oct1 H2O2-HelaGSE14283 14373717 14373745 28 0
Oct1 H2O2-HelaGSE14283 14594720 14594746 26 0
Oct1 H2O2-HelaGSE14283 14882972 14883029 57 0
Oct1 HelaGSE14283 13997289 13997320 31 0
Oct1 HelaGSE14283 14018239 14018278 39 0
Oct1 HelaGSE14283 14049564 14049613 49 0
Oct1 HelaGSE14283 14061301 14061337 36 0
Oct1 HelaGSE14283 14190852 14190888 36 0
Oct1 HelaGSE14283 14248098 14248126 28 0
Oct1 HelaGSE14283 14414672 14414703 31 0
Oct1 HelaGSE14283 14442182 14442239 57 0
Oct1 HelaGSE14283 14594713 14594746 33 0
Oct1 HelaGSE14283 14736088 14736132 44 0
Oct1 HelaGSE14283 14882921 14883039 118 0
Oct1 HelaGSE14283 14938948 14938976 28 0
Oct1 HelaGSE14283 15137274 15137310 36 0
Oct4 ESGSE20650 14459132 14459452 320 0
Oct4 hESGSE17917 15061575 15061859 284 0
RNAII Tamoxifen-MCF7GSE14664 14049570 14049612 42 0
RNAII Tamoxifen-MCF7GSE14664 14306803 14306889 86 0
TAF HelaGSE8489 14277163 14277379 216 0
hScc1 BcellGSE12603 14761917 14762266 349 0
hScc1 CdLSGSE12603 14761991 14762266 275 0
hScc1 G2GSE9613 14761961 14762266 305 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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