Annotation Detail for LCN8
Basic Information Top
| Gene Symbol: | LCN8 ( EP17,LCN5 ) |
|---|---|
| Gene Full Name: | lipocalin 8 |
| Band: | 9q34.3 |
| Quick Links | Entrez ID:138307; OMIM: 612902; Uniprot ID:LCN8_HUMAN; ENSEMBL ID: ENSG00000204001; HGNC ID: 27038 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 66 | N-linked (GlcNAc...) (Potential). | |
| 74 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 66 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 74 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 24 | O-linked | HMM predict |
| 24 | O-linked | HMM predict |
| 46 | Phosphoserine(IKK) | HMM predict |
| 74 | N-linked | HMM predict |
| 110 | Phosphotyrosine(Syk) | HMM predict |
| 166 | Cysteine | HMM predict |
- RefSeq ID: NM_178469
- Location:chr9 138768660-138772551
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 138772745 | 138772931 | 186 | 287 |
| CTCF | CD4 | SISSRdata | 138772745 | 138772931 | 186 | 287 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| hScc1 | Bcell | GSE12603 | 138767937 | 138768252 | 315 | 566 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| H3K27me3 | colorectal | cancer | 138769832 | 138770657 | 825 | 0 |
Validated miRNA targets