Annotation Detail for FAM69B
Basic Information Top
| Gene Symbol: | FAM69B ( C9orf136,MGC20262,pp6977 ) |
|---|---|
| Gene Full Name: | family with sequence similarity 69, member B |
| Band: | 9q34.3 |
| Quick Links | Entrez ID:138311; OMIM: NA; Uniprot ID:FA69B_HUMAN; ENSEMBL ID: ENSG00000165716; HGNC ID: 28290 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 6 | May mediate ER retention (By similarity). | |
| Location(AA) | Modifications | Resource |
|---|
| Location(AA) | Modification | Resource |
|---|---|---|
| 147 | Phosphothreonine(PKA) | HMM predict |
| 294 | Phosphotyrosine(INSR) | HMM predict |
- RefSeq ID: NM_152421
- Location:chr9 138726850-138738307
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| TFAP2C | MCF7 | GSE21234 | 138723322 | 138724030 | 708 | 3175 |
| hScc1 | Bcell | GSE12603 | 138715521 | 138716041 | 520 | 11070 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ETS1 | Jurkat | GSE17954 | 138741933 | 138742888 | 955 | 4103 |
| FOXA1 | MCF7 | GSE15244 | 138739940 | 138741226 | 1286 | 2276 |
| H3K4me3 | colorectal | cancer | 138741411 | 138742169 | 758 | 3483 |
| H3ac | HepG2 | E | 138740022 | 138742135 | 2113 | 2771 |
| Myc | K562 | GSE19551 | 138742071 | 138743497 | 1426 | 4477 |
| Myc | hES | GSE17917 | 138742360 | 138742673 | 313 | 4209 |
| NFkBII | GM15510 | GSE19485 | 138741778 | 138743048 | 1270 | 4106 |
| P300 | T0-glioblastoma | GSE21026 | 138742225 | 138742783 | 558 | 4197 |
| P300 | T30-glioblastoma | GSE21026 | 138741963 | 138743030 | 1067 | 4189 |
| PHF8 | 293T | GSE20725 | 138741830 | 138743109 | 1279 | 4162 |
| PHF8 | HeLa | GSE20725 | 138741679 | 138743671 | 1992 | 4368 |
| PHF8 | Hs68minusFBS | GSE20725 | 138741784 | 138742954 | 1170 | 4062 |
| PHF8 | Hs68plusFBS | GSE20725 | 138741670 | 138743742 | 2072 | 4399 |
| Pol2 | GM12878 | GSE19551 | 138742083 | 138742833 | 750 | 4151 |
| TAF | k562 | GSE8489 | 138740828 | 138742169 | 1341 | 3191 |
| TFAP2C | MCF7 | GSE21234 | 138739805 | 138741494 | 1689 | 2342 |
| VDR | GM10861-Unstim | GSE22484 | 138739855 | 138743179 | 3324 | 3210 |
| VDR | GM10861-stim | GSE22484 | 138739607 | 138743929 | 4322 | 3461 |
| hScc1 | Bcell | GSE12603 | 138740416 | 138741072 | 656 | 2437 |
| hScc1 | Bcell | GSE12603 | 138741847 | 138742711 | 864 | 3972 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| PHF8 | 293T | GSE20725 | 138726694 | 138727475 | 781 | 0 |
| TFAP2C | MCF7 | GSE21234 | 138735612 | 138736015 | 403 | 0 |
| hScc1 | Bcell | GSE12603 | 138728062 | 138728352 | 290 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27230 | mRNA | MGC20262 | chr9 | 136882866 | 136894324 | 539 | mRNA | chr9 | 136891654 | 136898473 | Sense/Antisense (SA) pairs | |