Annotation Detail for APOBEC3D
Basic Information Top
| Gene Symbol: | APOBEC3D ( APOBEC3DE,APOBEC3E,ARP6 ) |
|---|---|
| Gene Full Name: | apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D |
| Band: | 22q13.1 |
| Quick Links | Entrez ID:140564; OMIM: 609900; Uniprot ID:ABC3D_HUMAN; ENSEMBL ID: ENSG00000179750; HGNC ID: 17354 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 13 | Phosphotyrosine(EGFR) | HMM predict |
| 18 | Sulfotyrosine | HMM predict |
| 18 | Phosphotyrosine(Syk) | HMM predict |
| 18 | Phosphotyrosine(EGFR) | HMM predict |
| 109 | S-palmitoyl | HMM predict |
| 125 | N-linked | HMM predict |
| 129 | O-linked | HMM predict |
| 288 | O-linked | HMM predict |
| 311 | N-linked | HMM predict |
| 381 | Leucine | HMM predict |
- RefSeq ID: NM_152426
- Location:chr22 37747172-37751624
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| hScc1 | Bcell | GSE12603 | 37746712 | 37747029 | 317 | 302 |
| hScc1 | CdLS | GSE12603 | 37746311 | 37747029 | 718 | 503 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Oct4 | hES | GSE17917 | 37757544 | 37757886 | 342 | 6091 |
| Oct4 | hES | GSE21916 | 37757411 | 37758185 | 774 | 6174 |
| hScc1 | Bcell | GSE12603 | 37753476 | 37753769 | 293 | 1998 |
| hScc1 | Bcell | GSE12603 | 37756353 | 37756817 | 464 | 4961 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| E2F4 | G0 | GSE7516 | 37747365 | 37747628 | 263 | 0 |
| LIN9 | G0 | GSE7516 | 37747365 | 37748288 | 923 | 0 |
| LIN9 | S | GSE7516 | 37747365 | 37748288 | 923 | 0 |
| hScc1 | Bcell | GSE12603 | 37747437 | 37747823 | 386 | 0 |
| hScc1 | Bcell | GSE12603 | 37750892 | 37751935 | 1043 | 0 |
| p130 | G0 | GSE7516 | 37747365 | 37747628 | 263 | 0 |
Validated miRNA targets