Annotation Detail for SLC32A1
Basic Information Top
| Gene Symbol: | SLC32A1 ( VGAT,VIAAT ) |
|---|---|
| Gene Full Name: | solute carrier family 32 (GABA vesicular transporter), member 1 |
| Band: | 20q11.23 |
| Quick Links | Entrez ID:140679; OMIM: NA; Uniprot ID:VIAAT_HUMAN; ENSEMBL ID: ENSG00000101438; HGNC ID: 11018 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 341 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 341 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 18 | N-linked | HMM predict |
| 37 | Phosphothreonine(CK2) | HMM predict |
| 124 | N-linked | HMM predict |
| 127 | N-linked | HMM predict |
| 230 | Phosphotyrosine(EGFR) | HMM predict |
| 239 | Phosphoserine(ATM) | HMM predict |
| 341 | N-linked | HMM predict |
- RefSeq ID: NM_080552
- Location:chr20 36786518-36791428
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| H3K27me3 | colorectal | cancer | 36783371 | 36785843 | 2472 | 1912 |
| NRSF | mAb | Jurkat | 36771404 | 36772139 | 735 | 14747 |
| hScc1 | Bcell | GSE12603 | 36785564 | 36786744 | 1180 | 365 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 36793484 | 36793801 | 317 | 2214 |
| CTCF | CD4 | SISSRdata | 36793484 | 36793801 | 317 | 2214 |
| CTCF | G2 | GSE9613 | 36793309 | 36794021 | 712 | 2237 |
| Myc | K562 | GSE19551 | 36793365 | 36793978 | 613 | 2243 |
| hScc1 | Bcell | GSE12603 | 36792270 | 36793075 | 805 | 1244 |
| hScc1 | Bcell | GSE12603 | 36793460 | 36793875 | 415 | 2239 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CBP | Jurkat | GSE17954 | 36786618 | 36788124 | 1506 | 0 |
| CTCF | G2 | GSE9613 | 36787463 | 36788221 | 758 | 0 |
| CTCF | G2 | GSE9613 | 36788964 | 36789660 | 696 | 0 |
| H3K27me3 | colorectal | cancer | 36787305 | 36788122 | 817 | 0 |
| H3K27me3 | colorectal | cancer | 36788606 | 36789027 | 421 | 0 |
| KLF4 | hES | GSE17917 | 36787046 | 36787513 | 467 | 0 |
| hScc1 | Bcell | GSE12603 | 36787721 | 36788347 | 626 | 0 |
| hScc1 | Bcell | GSE12603 | 36788784 | 36789586 | 802 | 0 |
| hScc1 | Bcell | GSE12603 | 36790291 | 36790652 | 361 | 0 |
Validated miRNA targets