AutismKB 2.0

Annotation Detail for TRIM69


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Basic Information Top
Gene Symbol:TRIM69 ( HSD34,RNF36,Trif )
Gene Full Name: tripartite motif-containing 69
Band: 15q15-q21
Quick LinksEntrez ID:140691; OMIM: NA; Uniprot ID:TRI69_HUMAN; ENSEMBL ID: ENSG00000185880; HGNC ID: 17857
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
10N-linkedHMM predict
16Phosphotyrosine(INSR)HMM predict
20N-linkedHMM predict
89N-linkedHMM predict
93N-linkedHMM predict
241Phosphoserine(ATM)HMM predict
343Phosphothreonine(PKC)HMM predict
404Phosphoserine(IKK)HMM predict
408Phosphothreonine(CDC2)HMM predict
408Phosphothreonine(CDK)HMM predict
420N-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_080745
  • Location:chr15 42815851-42847316
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
H3ac HepG2E 42808818 42809183 365 6851
NFkBII GM12878GSE19485 42805441 42810371 4930 7946
NFkBII GM12892GSE19485 42805571 42810493 4922 7820
Pol2 GM12878GSE19551 42805594 42808353 2759 8878
p130 SenescentGSE19898 42808046 42808626 580 7516
p130 shRbQuiescentGSE19898 42808384 42809136 752 7092
p130 shRbSenescentGSE19898 42808127 42809031 904 7273
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 42864265 42864434 169 17033
CTCF CD4SISSRdata 42864265 42864434 169 17033
CTCF JurkatGSE12889 42864292 42864487 195 17073
NRSF mAbJurkat 42862553 42862877 324 15399
Oct1 H2O2-HelaGSE14283 42849203 42849232 29 1901
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF JurkatGSE12889 42818007 42818206 199 0
ER E2-MCF7GSE14664 42819774 42819817 43 0
hScc1 BcellGSE12603 42817880 42818084 204 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-147 hsa-mir-147 9 19721002
hsa-miR-155 hsa-mir-155 21 17242365
hsa-miR-155* hsa-mir-155 21 17242365
No data
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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