AutismKB 2.0

Annotation Detail for RIMS4


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Basic Information Top
Gene Symbol:RIMS4 ( C20orf190,RIM4,dJ781B1.3 )
Gene Full Name: regulating synaptic membrane exocytosis 4
Band: 20q13.12
Quick LinksEntrez ID:140730; OMIM: 611601; Uniprot ID:RIMS4_HUMAN; ENSEMBL ID: ENSG00000101098; HGNC ID: 16183
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
4Phosphoserine.
254Phosphoserine.
257Phosphoserine.
Location(AA) Modifications Resource
Location(AA) Modification Resource
1AcetylmethionineHMM predict
9Phosphoserine(CK1)HMM predict
66Phosphoserine(CK2)HMM predict
170Phosphothreonine(PKC)HMM predict
190Phosphoserine(CDC2)HMM predict
254Phosphoserine(CAMK2)HMM predict
257Phosphoserine(CK1)HMM predict
257Phosphoserine(IKK)HMM predict
268ArginineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_182970
  • Location:chr20 42813862-42872325
  • strand:-
No data
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF JurkatGSE12889 42861087 42861174 87 0
CTCF G2GSE9613 42862474 42863022 548 0
CTCF G2GSE9613 42865840 42866085 245 0
ER MCF7GSE19013 42827021 42828310 1289 0
FOXA1 MCF7GSE15244 42827603 42828738 1135 0
FOXA1 eGFPGSE10845 42827603 42828738 1135 0
NRSF JurkatGSE13047 42838539 42843299 4760 0
NRSF mAbJurkat 42826327 42826622 295 0
NRSF mAbJurkat 42834219 42836284 2065 0
NRSF mAbJurkat 42836769 42837368 599 0
NRSF mAbJurkat 42837814 42838024 210 0
NRSF mAbJurkat 42838349 42838583 234 0
NRSF mAbJurkat 42839025 42839422 397 0
NRSF mAbJurkat 42839855 42840282 427 0
NRSF mAbJurkat 42840949 42841259 310 0
NRSF mAbJurkat 42841871 42844026 2155 0
NRSF mAbJurkat 42844756 42844957 201 0
NRSF mAbJurkat 42846055 42847185 1130 0
NRSF mAbJurkat 42847961 42849328 1367 0
NRSF-mono JurkatQuESTdata 42838608 42840068 1460 0
NRSF-mono JurkatQuESTdata 42841761 42843154 1393 0
NRSF-mono JurkatQuESTdata 42847014 42847171 157 0
NRSF-poly JurkatQuESTdata 42838582 42841114 2532 0
NRSF-poly JurkatQuESTdata 42841144 42843003 1859 0
P300 T30-glioblastomaGSE21026 42867953 42868785 832 0
RARA MCF7GSE15244 42827603 42828779 1176 0
TAF HelaGSE8489 42826327 42826987 660 0
TFAP2C MCF7GSE21234 42816567 42816992 425 0
TFAP2C MCF7GSE21234 42827116 42827634 518 0
TFAP2C MCF7GSE21234 42827705 42828432 727 0
TFAP2C MCF7GSE21234 42847685 42848249 564 0
hScc1 BcellGSE12603 42814780 42815298 518 0
hScc1 BcellGSE12603 42815922 42816339 417 0
hScc1 BcellGSE12603 42830543 42830788 245 0
hScc1 BcellGSE12603 42864608 42865045 437 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
16408 mRNA chr20 42813049 42814368 506 mRNA RIMS4 chr20 42813862 42872326Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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