Annotation Detail for SMCR8
Basic Information Top
| Gene Symbol: | SMCR8 ( FLJ34716,FLJ60657 ) |
|---|---|
| Gene Full Name: | Smith-Magenis syndrome chromosome region, candidate 8 |
| Band: | 17p11.2 |
| Quick Links | Entrez ID:140775; OMIM: NA; Uniprot ID:SMCR8_HUMAN; ENSEMBL ID: ENSG00000176994; HGNC ID: 17921 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 417 | Phosphoserine. | |
| 465 | Phosphoserine. | |
| 467 | Phosphoserine. | |
| 468 | Phosphoserine. | |
| 471 | Phosphoserine. | |
| 487 | Phosphoserine. | |
| 489 | Phosphoserine. | |
| 492 | Phosphoserine. | |
| 494 | Phosphothreonine. | |
| 498 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 465 | Phosphoserine. | Swiss-Prot 53.0 |
| 467 | Phosphoserine. | Swiss-Prot 53.0 |
| 468 | Phosphoserine. | Swiss-Prot 53.0 |
| 471 | Phosphoserine. | Swiss-Prot 53.0 |
| 489 | Phosphoserine (By similarity). | Swiss-Prot 53.0 |
| 492 | Phosphoserine (By similarity). | Swiss-Prot 53.0 |
| 498 | Phosphoserine (By similarity). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 16 | Phosphotyrosine(INSR) | HMM predict |
| 16 | Phosphotyrosine(Syk) | HMM predict |
| 16 | Phosphotyrosine(EGFR) | HMM predict |
| 21 | Phosphotyrosine(Syk) | HMM predict |
| 21 | Phosphotyrosine(Abl) | HMM predict |
| 21 | Phosphotyrosine(SRC) | HMM predict |
| 30 | Phosphotyrosine(Syk) | HMM predict |
| 77 | N-linked | HMM predict |
| 180 | Phosphoserine(CK2) | HMM predict |
| 227 | Phosphoserine(ATM) | HMM predict |
| 279 | Phosphoserine(ATM) | HMM predict |
| 279 | Phosphoserine(IKK) | HMM predict |
| 282 | Phosphoserine(IKK) | HMM predict |
| 283 | O-linked | HMM predict |
| 284 | O-linked | HMM predict |
| 321 | Phosphothreonine(PKC) | HMM predict |
| 391 | Phosphoserine(CK1) | HMM predict |
| 400 | Phosphoserine(CK2) | HMM predict |
| 401 | Phosphoserine(CK2) | HMM predict |
| 438 | Phosphotyrosine(SRC) | HMM predict |
| 438 | Phosphotyrosine(INSR) | HMM predict |
| 438 | Phosphotyrosine(Syk) | HMM predict |
| 438 | Phosphotyrosine(EGFR) | HMM predict |
| 457 | Sulfotyrosine | HMM predict |
| 457 | Phosphotyrosine(INSR) | HMM predict |
| 457 | Phosphotyrosine(Syk) | HMM predict |
| 467 | Phosphoserine(CK2) | HMM predict |
| 477 | Phosphothreonine(PKC) | HMM predict |
| 489 | Phosphoserine(IKK) | HMM predict |
| 489 | Phosphoserine(ATM) | HMM predict |
| 492 | O-linked | HMM predict |
| 498 | Phosphoserine(CDC2) | HMM predict |
| 537 | Phosphotyrosine(EGFR) | HMM predict |
| 562 | Phosphoserine(ATM) | HMM predict |
| 562 | Phosphoserine(MAPK) | HMM predict |
| 579 | Phosphoserine(ATM) | HMM predict |
| 599 | O-linked | HMM predict |
| 600 | Phosphothreonine(MAPK) | HMM predict |
| 600 | Phosphothreonine(CDK) | HMM predict |
| 606 | Phosphoserine(CK1) | HMM predict |
| 636 | N-linked | HMM predict |
| 642 | N-linked | HMM predict |
| 664 | Phosphoserine(CK1) | HMM predict |
| 670 | N-linked | HMM predict |
| 672 | Phosphoserine(CK1) | HMM predict |
| 675 | O-linked | HMM predict |
| 676 | O-linked | HMM predict |
| 676 | Phosphoserine(IKK) | HMM predict |
| 679 | O-linked | HMM predict |
| 683 | O-linked | HMM predict |
| 790 | Phosphoserine(CDC2) | HMM predict |
| 814 | N-linked | HMM predict |
| 844 | Phosphotyrosine(Syk) | HMM predict |
| 864 | S-palmitoyl | HMM predict |
| 927 | Phenylalanine | HMM predict |
| 929 | Phenylalanine | HMM predict |
| 930 | Phenylalanine | HMM predict |
- RefSeq ID: NM_144775
- Location:chr17 18159440-18167107
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| TFAP2C | MCF7 | GSE21234 | 18158908 | 18159820 | 912 | 77 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 18167281 | 18168084 | 803 | 575 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| H3ac | HepG2 | E | 18159593 | 18161067 | 1474 | 0 |
| RARG | MCF7 | GSE15244 | 18160165 | 18160850 | 685 | 0 |
| USF1 | HepG2 | E | 18157423 | 18161933 | 4510 | 0 |
| USF2 | HepG2 | E | 18158904 | 18160392 | 1488 | 0 |
Validated miRNA targets