AutismKB 2.0

Annotation Detail for LDLRAD3


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Basic Information Top
Gene Symbol:LDLRAD3 ( - )
Gene Full Name: low density lipoprotein receptor class A domain containing 3
Band: 11p13
Quick LinksEntrez ID:143458; OMIM: NA; Uniprot ID:LRAD3_HUMAN; ENSEMBL ID: ENSG00000179241; HGNC ID: 27046
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
24N-linked (GlcNAc...) (Potential).
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_174902
  • Location:chr11 35922187-36209416
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER E2-MCF7GSE14664 35911873 35911951 78 10276
TAF HelaGSE8489 35903934 35904156 222 18143
TAF HelaGSE8489 35905081 35906099 1018 16598
TFAP2C MCF7GSE21234 35905867 35906238 371 16135
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 HelaGSE14283 36217225 36217255 30 7824
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP T30-glioblastomaGSE21026 36127534 36128547 1013 0
CTCF HelaGSE12889 36109989 36110174 185 0
ER E2-MCF7GSE14664 35983396 35983429 33 0
ER E2-MCF7GSE14664 36012824 36012869 45 0
ER E2-MCF7GSE14664 36087467 36087519 52 0
ER Fulvestrant-MCF7GSE14664 36012829 36012870 41 0
ER Fulvestrant-MCF7GSE14664 36025524 36025558 34 0
ER MCF7GSE19013 35927985 35928577 592 0
ER MCF7GSE19013 36004362 36004893 531 0
FOXA1 DLD1GSE12801 35947670 35948145 475 0
FOXA1 MCF7GSE15244 35947175 35948145 970 0
FOXA1 MCF7GSE15244 36074587 36074764 177 0
FOXA1 MCF7GSE15244 36084012 36084348 336 0
Fos K562GSE19551 36127577 36128466 889 0
Gata2 K562GSE18868 36082823 36084013 1190 0
Myc hESGSE17917 35991926 35992164 238 0
NRSF JurkatSISSRdata 36084428 36084569 141 0
NRSF mAbJurkat 36163716 36164879 1163 0
NRSF-mono JurkatQuESTdata 36084335 36084568 233 0
NRSF pAbJurkat 36163754 36164736 982 0
NRSF pAbJurkat 36205136 36205953 817 0
Nanog ESGSE20650 36064464 36064946 482 0
Nanog ESGSE20650 36149204 36149716 512 0
Nanog hESGSE18292 36011493 36011902 409 0
Nanog hESGSE18292 36070824 36071187 363 0
Nanog hESGSE18292 36087883 36088716 833 0
Oct1 H2O2-HelaGSE14283 35994793 35994826 33 0
Oct1 H2O2-HelaGSE14283 36024879 36024922 43 0
Oct1 HelaGSE14283 35983392 35983440 48 0
Oct1 HelaGSE14283 35994792 35994825 33 0
Oct1 HelaGSE14283 36000236 36000283 47 0
Oct1 HelaGSE14283 36012827 36012881 54 0
Oct1 HelaGSE14283 36024879 36024914 35 0
Oct1 HelaGSE14283 36025524 36025563 39 0
Oct1 HelaGSE14283 36049916 36049962 46 0
Oct1 HelaGSE14283 36051875 36051925 50 0
Oct1 HelaGSE14283 36073560 36073592 32 0
Oct1 HelaGSE14283 36096846 36096878 32 0
Oct1 HelaGSE14283 36131967 36131996 29 0
Oct4 hESGSE21916 36064477 36064885 408 0
Oct4 hESGSE21916 36087822 36088714 892 0
P300 T30-glioblastomaGSE21026 36127360 36128537 1177 0
PHF8 HeLaGSE20725 35921416 35923176 1760 0
RARA MCF7GSE15244 36084012 36084199 187 0
RARG MCF7GSE15244 35980546 35980896 350 0
RARG MCF7GSE15244 36012607 36013611 1004 0
SRF HelaGSE8489 36163500 36165088 1588 0
STAT1 HeLaGSE12782 36004270 36005619 1349 0
STAT1 HeLaGSE12783 36004304 36005483 1179 0
Sox2 hESGSE18292 36087802 36088458 656 0
Stat6 IL-4-hr4GSE17850 36140736 36141572 836 0
TAF HelaGSE8489 36163537 36165048 1511 0
TAF k562GSE8489 36163500 36164845 1345 0
TFAP2C MCF7GSE21234 35978953 35979260 307 0
hScc1 BcellGSE12603 36020267 36020646 379 0
hScc1 BcellGSE12603 36109933 36110331 398 0
hScc1 CdLSGSE12603 36020014 36020646 632 0
hScc1 CdLSGSE12603 36047771 36048311 540 0
hScc1 CdLSGSE12603 36109658 36110432 774 0
hScc1 CdLSGSE12603 36127943 36128347 404 0
hScc1 G2GSE9613 35921755 35922892 1137 0
hScc1 G2GSE9613 36127907 36128347 440 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
4314 mRNA LOC143458 chr11 35922187 36209417 14613 HTC chr11 36041411 36056024 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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