Annotation Detail for SPTY2D1

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Basic Information Top

Gene Symbol:	SPTY2D1 ( DKFZp686F1942,DKFZp686I068,FLJ39441 )
Gene Full Name:	SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
Band:	11p15.1
Quick Links	Entrez ID:144108; OMIM: NA; Uniprot ID:SPT2_HUMAN; ENSEMBL ID: ENSG00000179119; HGNC ID: 26818
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:2 results
Experimental PTM Sites from dbPTM:0 results
Predicted PTM Sites by profile HMM from dbPTM:0 results

Location(AA)	Modification
582	N6-acetyllysine.
599	Phosphoserine.

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_194285
Location:chr11 18584524-18612595
strand:-

Upstream the gene:10 results
Downstream the gene:0 results
Inside the gene:8 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CBP	T30-glioblastoma	GSE21026	18612112	18613389	1277	155
CTCF	CD4	GSE12889	18629389	18629650	261	16924
CTCF	CD4	SISSRdata	18629389	18629650	261	16924
CTCF	Jurkat	GSE12889	18629281	18629646	365	16868
Oct1	Hela	GSE14283	18616995	18617034	39	4419
PHF8	293T	GSE20725	18611960	18613332	1372	51
PHF8	Hs68plusFBS	GSE20725	18611880	18613364	1484	27
hScc1	Bcell	GSE12603	18612040	18613155	1115	2
p130	shRbQuiescent	GSE19898	18612761	18613030	269	300
p130	shRbSenescent	GSE19898	18612609	18612953	344	186

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
ETS1	Jurkat	GSE17954	18611473	18613211	1738	0
FOXA1	MCF7	GSE15244	18611631	18613263	1632	0
GABP	Hela	GSE8489	18611864	18612493	629	0
GABP	k562	GSE8489	18611150	18612493	1343	0
H3K4me3	colorectal	cancer	18611327	18612493	1166	0
H3ac	HepG2	E	18611251	18612550	1299	0
RARG	MCF7	GSE15244	18611786	18613263	1477	0
hScc1	CdLS	GSE12603	18611365	18612870	1505	0

Validated miRNA targets

Cis-Nats regulation

Cluster ID	Plue Type	Plus Gene Name	Plus Chromosome	Plus Start	Plus End	Overlap Length	Minus Type	Minus Gene Name	Minus Chromosome	Minus Star	Minus End	Type
4198	mRNA		chr11	18577926	18588378	717	mRNA	FLJ39441	chr11	18584524	18612596	Sense/Antisense (SA) pairs

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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