AutismKB 2.0

Annotation Detail for PRICKLE1


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:PRICKLE1 ( EPM1B,FLJ31627,FLJ31937,MGC138902,MGC138903,RILP )
Gene Full Name: prickle homolog 1 (Drosophila)
Band: 12q12
Quick LinksEntrez ID:144165; OMIM: 608500; Uniprot ID:PRIC1_HUMAN; ENSEMBL ID: ENSG00000139174; HGNC ID: 17019
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
681Phosphoserine (By similarity).
828Cysteine methyl ester (Probable).
Location(AA) Modifications Resource
Location(AA) Modification Resource
20PhosphoserineHMM predict
22Phosphoserine(CK2)HMM predict
26Phosphoserine(IKK)HMM predict
62Phosphoserine(CDC2)HMM predict
218S-palmitoylHMM predict
239S-palmitoylHMM predict
240S-palmitoylHMM predict
315Phosphoserine(CK2)HMM predict
318Phosphoserine(ATM)HMM predict
353Phosphoserine(MAPK)HMM predict
379Phosphoserine(CK1)HMM predict
414Phosphotyrosine(Syk)HMM predict
472Phosphotyrosine(Jak)HMM predict
485Phosphotyrosine(EGFR)HMM predict
536Phosphoserine(IKK)HMM predict
544N-linkedHMM predict
622Phosphoserine(PKA)HMM predict
624Phosphoserine(IKK)HMM predict
624Phosphoserine(PKA)HMM predict
668Phosphoserine(CK1)HMM predict
709Phosphotyrosine(EGFR)HMM predict
715N-linkedHMM predict
761Phosphoserine(IKK)HMM predict
765Phosphoserine(CDC2)HMM predict
766Phosphoserine(CDC2)HMM predict
770Phosphoserine(CK2)HMM predict
772Phosphoserine(CK1)HMM predict
777Phosphotyrosine(INSR)HMM predict
794SulfotyrosineHMM predict
800Phosphoserine(MAPK)HMM predict
803O-linkedHMM predict
807O-linkedHMM predict
814Phosphothreonine(PKC)HMM predict
815Phosphothreonine(PKC)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_153026
  • Location:chr12 41139340-41269744
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
FOXA1 DLD1GSE12801 41273772 41274790 1018 4537
FOXA1 MCF7GSE15244 41270316 41270806 490 817
FOXA1 MCF7GSE15244 41273772 41274369 597 4326
FoxA1 MCF7MACSdata 41273899 41274415 516 4413
H3K27me3 colorectalcancer 41270019 41272013 1994 1272
Oct1 H2O2-HelaGSE14283 41276974 41277004 30 7245
Oct1 HelaGSE14283 41276974 41277007 33 7246
RARG MCF7GSE15244 41270316 41271307 991 1067
hScc1 BcellGSE12603 41270471 41270726 255 854
hScc1 G2GSE9613 41269369 41270411 1042 146
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 41249361 41249603 242 0
CTCF CD4SISSRdata 41249361 41249603 242 0
CTCF JurkatGSE12889 41162846 41163140 294 0
CTCF G2GSE9613 41146196 41146417 221 0
CTCF G2GSE9613 41162478 41163926 1448 0
CTCF G2GSE9613 41164261 41164532 271 0
CTCF G2GSE9613 41245718 41246144 426 0
CTCF G2GSE9613 41249494 41249955 461 0
CTCF G2GSE9613 41269296 41270101 805 0
ER E2-MCF7GSE14664 41159393 41159425 32 0
FOXA1 DLD1GSE12801 41164189 41164641 452 0
FOXA1 DLD1GSE12801 41190857 41191342 485 0
FOXA1 DLD1GSE12801 41254785 41255454 669 0
FOXA1 MCF7GSE15244 41162362 41162808 446 0
FOXA1 MCF7GSE15244 41164225 41164676 451 0
FOXA1 MCF7GSE15244 41267653 41268167 514 0
H3K27me3 colorectalcancer 41267323 41269257 1934 0
Nanog ESGSE20650 41139378 41140268 890 0
Nanog hESGSE18292 41139651 41140012 361 0
Nanog hESGSE18292 41190688 41191358 670 0
Oct1 HelaGSE14283 41156554 41156591 37 0
Oct1 HelaGSE14283 41159392 41159429 37 0
Oct1 HelaGSE14283 41161185 41161217 32 0
Oct1 HelaGSE14283 41248186 41248229 43 0
Oct4 hESGSE17917 41190984 41191203 219 0
Oct4 hESGSE21916 41163703 41164966 1263 0
Oct4 hESGSE21916 41165841 41166353 512 0
Sox2 hESGSE18292 41190710 41191187 477 0
hScc1 BcellGSE12603 41149377 41149813 436 0
hScc1 BcellGSE12603 41162478 41164429 1951 0
hScc1 BcellGSE12603 41268919 41270237 1318 0
hScc1 CdLSGSE12603 41149377 41149705 328 0
hScc1 CdLSGSE12603 41162512 41163926 1414 0
hScc1 CdLSGSE12603 41249248 41249955 707 0
hScc1 CdLSGSE12603 41268848 41270377 1529 0
hScc1 G2GSE9613 41162478 41164568 2090 0
hScc1 G2GSE9613 41245432 41246144 712 0
hScc1 G2GSE9613 41249224 41249990 766 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
5890 mRNA PRICKLE1 chr12 41139434 41146180 1858 mRNA PRICKLE1 chr12 41139340 41269745Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved