Annotation Detail for CSRP2

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Basic Information Top

Gene Symbol:	CSRP2 ( CRP2,LMO5,SmLIM )
Gene Full Name:	cysteine and glycine-rich protein 2
Band:	12q21.2
Quick Links	Entrez ID:1466; OMIM: 601871; Uniprot ID:CSRP2_HUMAN; ENSEMBL ID: ENSG00000175183; HGNC ID: 2470
Relate to Another Database:	SFARIGene; denovo-db

Pathways, Diseases and Drugs

TF binding site

Post Translation Modification

PTM Sites from Uniprot:1 results
Experimental PTM Sites from dbPTM:0 results
Predicted PTM Sites by profile HMM from dbPTM:5 results

Location(AA)	Modification
69	Nuclear localization signal (Potential).

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

RefSeq ID: NM_001321
Location:chr12 75776626-75796929
strand:-

Upstream the gene:7 results
Downstream the gene:0 results
Inside the gene:11 results

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	G2	GSE9613	75796484	75797471	987	48
ER	MCF7	GSE19013	75797357	75797919	562	709
H3K27me3	colorectal	cancer	75797583	75798528	945	1126
Rb	Senescent	GSE19898	75796693	75797345	652	90
hScc1	Bcell	GSE12603	75796942	75797435	493	259
hScc1	CdLS	GSE12603	75796906	75797435	529	241
p130	Senescent	GSE19898	75796702	75797284	582	64

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
ER	MCF7	GSE19013	75796547	75797115	568	0
FOXA1	MCF7	GSE15244	75787504	75788051	547	0
GATA3	MCF7	GSE15244	75788914	75789374	460	0
H3K27me3	colorectal	cancer	75795298	75796169	871	0
NRSF	Jurkat	SISSRdata	75784788	75784935	147	0
Oct4	hES	GSE17917	75790230	75790591	361	0
Oct4	hES	GSE21916	75790208	75790679	471	0
RARA	MCF7	GSE15244	75787504	75788089	585	0
p130	Quiescent	GSE19898	75796840	75796947	107	0
p130	shRbSenescent	GSE19898	75796775	75796977	202	0
p63	keratinocytes	GSE17611	75794428	75795285	857	0

Validated miRNA targets

Cis-Nats regulation

Simple Query:

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

Studies: 1,036
Genes: 1,379
CNVs/SVs: 5,420
SNVs/Indels: 11,669
de novo Mutations: 5,669
Mosaics: 789
Linkage Regions: 172

Paper Collected: 6/30/2018

Last Update: 8/26/2018

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