AutismKB 2.0

Annotation Detail for SLFN13


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:SLFN13 ( DKFZp666J196,DKFZp686I026,FLJ31952,SLFN10 )
Gene Full Name: schlafen family member 13
Band: 17q12
Quick LinksEntrez ID:146857; OMIM: NA; Uniprot ID:SLN13_HUMAN; ENSEMBL ID: ENSG00000154760; HGNC ID: 26481
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
No data
No data
Location(AA) Modification Resource
140Phosphothreonine(PKA)HMM predict
182N-linkedHMM predict
187N-linkedHMM predict
190Phosphotyrosine(SRC)HMM predict
200SulfotyrosineHMM predict
209Phosphoserine(CDC2)HMM predict
370Phosphoserine(IKK)HMM predict
370Phosphoserine(CK1)HMM predict
372Phosphoserine(ATM)HMM predict
374Phosphoserine(IKK)HMM predict
374Phosphoserine(CDK)HMM predict
376Phosphoserine(IKK)HMM predict
467N-linkedHMM predict
518Phosphoserine(MAPK)HMM predict
518Phosphoserine(CDC2)HMM predict
540Phosphoserine(IKK)HMM predict
782N-linkedHMM predict
886AlanineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_144682
  • Location:chr17 30786227-30799884
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
TAFII hESGSE17917 30811587 30812003 416 11911
hScc1 BcellGSE12603 30800402 30800996 594 815
p130 QuiescentGSE19898 30799925 30800089 164 123
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Jun K562GSE19551 30784733 30785211 478 1256
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
hScc1 BcellGSE12603 30799319 30799559 240 0
hScc1 CdLSGSE12603 30799319 30799605 286 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
10964 EST chr17 30790115 30790641 526 mRNA FLJ31952 chr17 30786227 30799885Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved