AutismKB 2.0

Annotation Detail for CD300LG


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Basic Information Top
Gene Symbol:CD300LG ( CLM-9,CLM9,NEPMUCIN,TREM-4,TREM4 )
Gene Full Name: CD300 molecule-like family member g
Band: 17q21.31
Quick LinksEntrez ID:146894; OMIM: 610520; Uniprot ID:CLM9_HUMAN; ENSEMBL ID: ENSG00000161649; HGNC ID: 30455
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
96N-linked (GlcNAc...) (Potential).
137O-linked (GalNAc...) (Potential).
143O-linked (GalNAc...) (Potential).
144O-linked (GalNAc...) (Potential).
155O-linked (GalNAc...) (Potential).
161O-linked (GalNAc...) (Potential).
170O-linked (GalNAc...) (Potential).
171O-linked (GalNAc...) (Potential).
177O-linked (GalNAc...) (Potential).
187O-linked (GalNAc...) (Potential).
195O-linked (GalNAc...) (Potential).
196O-linked (GalNAc...) (Potential).
199O-linked (GalNAc...) (Potential).
201O-linked (GalNAc...) (Potential).
202O-linked (GalNAc...) (Potential).
207O-linked (GalNAc...) (Potential).
208O-linked (GalNAc...) (Potential).
213O-linked (GalNAc...) (Potential).
214O-linked (GalNAc...) (Potential).
222O-linked (GalNAc...) (Potential).
223O-linked (GalNAc...) (Potential).
224O-linked (GalNAc...) (Potential).
228O-linked (GalNAc...) (Potential).
229O-linked (GalNAc...) (Potential).
237O-linked (GalNAc...) (Potential).
Location(AA) Modifications Resource
No data
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_145273
  • Location:chr17 39280072-39296519
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 39279225 39279444 219 738
CTCF CD4SISSRdata 39279225 39279444 219 738
CTCF G2GSE9613 39272482 39272864 382 7400
CTCF G2GSE9613 39279103 39279281 178 881
ERG prostate-cancerGSE14092 39272345 39273187 842 7307
Sox2 hESGSE18292 39279055 39279257 202 917
TFAP2C MCF7GSE21234 39273655 39274178 523 6156
c MYCMCF7 39274891 39275211 320 5022
hScc1 BcellGSE12603 39279103 39279381 278 831
p130 SenescentGSE19898 39279076 39279393 317 838
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
Oct1 HelaGSE14283 39282739 39282769 30 0
hScc1 BcellGSE12603 39282122 39282355 233 0
hScc1 BcellGSE12603 39294837 39295229 392 0
Validated miRNA targets Top
Cis-Nats regulation Top

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  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018