Annotation Detail for TMC4
Basic Information Top
| Gene Symbol: | TMC4 ( MGC39329 ) |
|---|---|
| Gene Full Name: | transmembrane channel-like 4 |
| Band: | 19q13.42 |
| Quick Links | Entrez ID:147798; OMIM: NA; Uniprot ID:TMC4_HUMAN; ENSEMBL ID: ENSG00000167608; HGNC ID: 22998 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 107 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 101 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 76 | O-linked | HMM predict |
| 129 | Phosphothreonine(CK2) | HMM predict |
| 198 | O-linked | HMM predict |
| 199 | Phosphoserine(IKK) | HMM predict |
| 227 | Phosphotyrosine(INSR) | HMM predict |
| 452 | Phosphoserine(CK2) | HMM predict |
| 507 | S-palmitoyl | HMM predict |
| 570 | Phosphoserine(MAPK) | HMM predict |
| 575 | Phosphothreonine(PKC) | HMM predict |
| 579 | Phosphoserine(PKG) | HMM predict |
| 632 | Phosphoserine(CK1) | HMM predict |
| 632 | O-linked | HMM predict |
| 684 | Phosphothreonine(CK2) | HMM predict |
- RefSeq ID: NM_144686
- Location:chr19 59355658-59368663
- strand:-
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| LIN9 | S | GSE7516 | 59354921 | 59356378 | 1457 | 9 |
| p130 | Senescent | GSE19898 | 59355130 | 59356075 | 945 | 56 |
| p130 | shRbQuiescent | GSE19898 | 59355062 | 59356241 | 1179 | 7 |
| p130 | G0 | GSE7516 | 59355166 | 59356118 | 952 | 17 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 59364037 | 59364313 | 276 | 0 |
| CTCF | CD4 | SISSRdata | 59364037 | 59364313 | 276 | 0 |
| CTCF | Hela | GSE12889 | 59363996 | 59364316 | 320 | 0 |
| CTCF | Jurkat | GSE12889 | 59364051 | 59364349 | 298 | 0 |
| CTCF | G2 | GSE9613 | 59363839 | 59364284 | 445 | 0 |
| CTCF | G2 | GSE9613 | 59367054 | 59367486 | 432 | 0 |
| E2F4 | G0 | GSE7516 | 59355239 | 59356079 | 840 | 0 |
| LIN9 | G0 | GSE7516 | 59355130 | 59356822 | 1692 | 0 |
| Myc | K562 | GSE19551 | 59363988 | 59364324 | 336 | 0 |
| Oct1 | H2O2-Hela | GSE14283 | 59367208 | 59367243 | 35 | 0 |
| Oct1 | Hela | GSE14283 | 59367078 | 59367117 | 39 | 0 |
| Oct1 | Hela | GSE14283 | 59367210 | 59367240 | 30 | 0 |
| TFAP2C | MCF7 | GSE21234 | 59367849 | 59368929 | 1080 | 0 |
| hScc1 | Bcell | GSE12603 | 59359836 | 59360479 | 643 | 0 |
| p130 | Quiescent | GSE19898 | 59355439 | 59356021 | 582 | 0 |
| p130 | shRbSenescent | GSE19898 | 59355430 | 59356333 | 903 | 0 |
| p130 | S | GSE7516 | 59355239 | 59356079 | 840 | 0 |
Validated miRNA targets