Annotation Detail for CAPN12
Basic Information Top
| Gene Symbol: | CAPN12 ( MGC20576 ) |
|---|---|
| Gene Full Name: | calpain 12 |
| Band: | 19q13.2 |
| Quick Links | Entrez ID:147968; OMIM: 608839; Uniprot ID:CAN12_HUMAN; ENSEMBL ID: ENSG00000182472; HGNC ID: 13249 |
| Relate to Another Database: | SFARIGene; denovo-db |
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| Location(AA) | Modification | Resource |
|---|---|---|
| 32 | Phosphotyrosine(EGFR) | HMM predict |
| 249 | Phosphotyrosine(INSR) | HMM predict |
| 303 | Phosphothreonine(PKA) | HMM predict |
| 348 | Phosphoserine(CDC2) | HMM predict |
| 417 | Methylarginine | HMM predict |
| 521 | Phosphoserine(PKC) | HMM predict |
| 569 | Phosphoserine(ATM) | HMM predict |
| 692 | S-palmitoyl | HMM predict |
| 706 | S-farnesyl | HMM predict |
| 710 | Arginine | HMM predict |
- RefSeq ID: NM_144691
- Location:chr19 43912671-43926953
- strand:-
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| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ER | MCF7 | GSE19013 | 43913910 | 43914802 | 892 | 0 |
| ER | MCF7 | GSE19013 | 43918549 | 43919330 | 781 | 0 |
| H3ac | HepG2 | E | 43920040 | 43920807 | 767 | 0 |
| TFAP2C | MCF7 | GSE21234 | 43914246 | 43914678 | 432 | 0 |
| TFAP2C | MCF7 | GSE21234 | 43916984 | 43918045 | 1061 | 0 |
| p130 | shRbQuiescent | GSE19898 | 43916085 | 43916447 | 362 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13178 | mRNA | ACTN4 | chr19 | 43830166 | 43913010 | 339 | mRNA | CAPN12 | chr19 | 43912671 | 43926954 | Sense/Antisense (SA) pairs |