Annotation Detail for C1orf52
Basic Information Top
| Gene Symbol: | C1orf52 ( FLJ44982,RP11-234D19.1,gm117 ) |
|---|---|
| Gene Full Name: | chromosome 1 open reading frame 52 |
| Band: | 1p22.3 |
| Quick Links | Entrez ID:148423; OMIM: NA; Uniprot ID:CA052_HUMAN; ENSEMBL ID: ENSG00000162642; HGNC ID: 24871 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 132 | Phosphotyrosine. | |
| 158 | Phosphoserine. | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 132 | Phosphotyrosine. | Swiss-Prot 53.0 |
| 132 | Phosphotyrosine | Phospho.ELM 6.0 |
| 158 | Phosphoserine. | Swiss-Prot 53.0 |
| 158 | Phosphoserine | Phospho.ELM 6.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 17 | O-linked | HMM predict |
| 20 | Phosphoserine(ATM) | HMM predict |
| 22 | Phosphoserine(CK2) | HMM predict |
| 23 | Phosphoserine(CK2) | HMM predict |
| 23 | Phosphoserine(ATM) | HMM predict |
| 34 | Phosphothreonine(PKC) | HMM predict |
| 35 | O-linked | HMM predict |
| 113 | Phosphothreonine(PKC) | HMM predict |
| 158 | Phosphoserine(CK2) | HMM predict |
- RefSeq ID: NM_198077
- Location:chr1 85490243-85497912
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 85497870 | 85498272 | 402 | 159 |
| CTCF | CD4 | SISSRdata | 85497870 | 85498272 | 402 | 159 |
| GABP | k562 | GSE8489 | 85498004 | 85499279 | 1275 | 729 |
| GABP | k562 | GSE8489 | 85499750 | 85500379 | 629 | 2152 |
| hScc1 | CdLS | GSE12603 | 85497656 | 85498264 | 608 | 48 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | CD4 | GSE12889 | 85478722 | 85478924 | 202 | 11421 |
| CTCF | CD4 | SISSRdata | 85478722 | 85478924 | 202 | 11421 |
| TFAP2C | MCF7 | GSE21234 | 85481726 | 85482149 | 423 | 8306 |
| hScc1 | CdLS | GSE12603 | 85478520 | 85479078 | 558 | 11445 |
| p130 | Quiescent | GSE19898 | 85482599 | 85482819 | 220 | 7535 |
| p130 | Senescent | GSE19898 | 85482638 | 85482844 | 206 | 7503 |
| p130 | shRbSenescent | GSE19898 | 85482655 | 85482960 | 305 | 7436 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 85497284 | 85498333 | 1049 | 0 |
| GABP | k562 | GSE8489 | 85495099 | 85496068 | 969 | 0 |
| GABP | k562 | GSE8489 | 85496437 | 85497107 | 670 | 0 |
| H3K4me3 | colorectal | cancer | 85496437 | 85497318 | 881 | 0 |
| H3ac | HepG2 | E | 85496437 | 85497141 | 704 | 0 |
| Myc | hES | GSE17917 | 85497487 | 85497878 | 391 | 0 |
| PHF8 | 293T | GSE20725 | 85497325 | 85498381 | 1056 | 0 |
| PHF8 | HeLa | GSE20725 | 85497231 | 85498319 | 1088 | 0 |
| TAF | k562 | GSE8489 | 85496437 | 85496764 | 327 | 0 |
| TAFII | hES | GSE17917 | 85497625 | 85498180 | 555 | 0 |
| hScc1 | Bcell | GSE12603 | 85497656 | 85498152 | 496 | 0 |
| hScc1 | CdLS | GSE12603 | 85493011 | 85493469 | 458 | 0 |
Validated miRNA targets