Annotation Detail for TMEM56
Basic Information Top
| Gene Symbol: | TMEM56 ( FLJ31842,MGC102912 ) |
|---|---|
| Gene Full Name: | transmembrane protein 56 |
| Band: | 1p21.3 |
| Quick Links | Entrez ID:148534; OMIM: NA; Uniprot ID:TMM56_HUMAN; ENSEMBL ID: ENSG00000152078; HGNC ID: 26477 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 165 | N6-acetyllysine. | |
| Location(AA) | Modifications | Resource |
|---|
| Location(AA) | Modification | Resource |
|---|---|---|
| 196 | Sulfotyrosine | HMM predict |
| 256 | Phosphoserine(PKG) | HMM predict |
- RefSeq ID: NM_152487
- Location:chr1 95355571-95431461
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CBP | T0-glioblastoma | GSE21026 | 95336333 | 95336922 | 589 | 18944 |
| CTCF | CD4 | GSE12889 | 95354929 | 95355132 | 203 | 541 |
| CTCF | CD4 | SISSRdata | 95354929 | 95355132 | 203 | 541 |
| CTCF | G2 | GSE9613 | 95354873 | 95355700 | 827 | 285 |
| Oct1 | Hela | GSE14283 | 95355347 | 95355381 | 34 | 208 |
| P300 | T0-glioblastoma | GSE21026 | 95335953 | 95336933 | 980 | 19129 |
| P300 | T30-glioblastoma | GSE21026 | 95336039 | 95337064 | 1025 | 19020 |
| Rb | Growing | GSE19898 | 95354955 | 95355159 | 204 | 515 |
| Rb | Quiescent | GSE19898 | 95354973 | 95355097 | 124 | 537 |
| hScc1 | CdLS | GSE12603 | 95354737 | 95355788 | 1051 | 309 |
| p130 | shRbSenescent | GSE19898 | 95354908 | 95355115 | 207 | 560 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| ER | E2-MCF7 | GSE14664 | 95435282 | 95435317 | 35 | 3838 |
| Oct1 | Hela | GSE14283 | 95450284 | 95450312 | 28 | 18837 |
| PAX3-FKHR | Rh4 | GSE19063 | 95435483 | 95436865 | 1382 | 4713 |
| Stat6 | IL-4-hr4 | GSE17850 | 95445093 | 95445643 | 550 | 13907 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Gata2 | K562 | GSE18868 | 95407655 | 95408162 | 507 | 0 |
| H3ac | HepG2 | E | 95356290 | 95358318 | 2028 | 0 |
| H3ac | HepG2 | E | 95358634 | 95359585 | 951 | 0 |
| Myc | K562 | GSE19551 | 95417818 | 95418059 | 241 | 0 |
| Oct1 | Hela | GSE14283 | 95371142 | 95371187 | 45 | 0 |
| Oct1 | Hela | GSE14283 | 95393085 | 95393156 | 71 | 0 |
| Rb | Growing | GSE19898 | 95426957 | 95427105 | 148 | 0 |
| TAF | Hela | GSE8489 | 95371095 | 95371897 | 802 | 0 |
| TAF | k562 | GSE8489 | 95356322 | 95356921 | 599 | 0 |
| TAF | k562 | GSE8489 | 95371131 | 95372955 | 1824 | 0 |
| USF2 | HepG2 | E | 95360538 | 95361289 | 751 | 0 |
| hScc1 | Bcell | GSE12603 | 95355111 | 95356122 | 1011 | 0 |
| p63 | keratinocytes | GSE17611 | 95376222 | 95377031 | 809 | 0 |
Validated miRNA targets