AutismKB 2.0

Annotation Detail for CTBP1


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Basic Information Top
Gene Symbol:CTBP1 ( BARS,MGC104684 )
Gene Full Name: C-terminal binding protein 1
Band: 4p16.3
Quick LinksEntrez ID:1487; OMIM: 602618; Uniprot ID:CTBP1_HUMAN; ENSEMBL ID: ENSG00000159692; HGNC ID: 2494
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
300Phosphoserine.
422Phosphoserine; by HIPK2.
Location(AA) Modifications Resource
422Phosphoserine (by HIPK2).Swiss-Prot 53.0
428Glycyl lysine isopeptide (Lys-Gly)(interchain with G-Cter in SUMO).Swiss-Prot 53.0
Location(AA) Modification Resource
144Phosphothreonine(PKA)HMM predict
324Phosphoserine(PKA)HMM predict
379Phosphotyrosine(Abl)HMM predict
406Phosphoserine(CK1)HMM predict
422O-linkedHMM predict
422Phosphoserine(CDC2)HMM predict
426O-linkedHMM predict
426Phosphothreonine(PKC)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001012614
  • Location:chr4 1195227-1232907
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 1233123 1233666 543 487
PHF8 293TGSE20725 1232617 1233514 897 158
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP JurkatGSE17954 1183767 1187715 3948 9487
CBP T30-glioblastomaGSE21026 1183923 1184852 929 10840
CTCF G2GSE9613 1176186 1177107 921 18581
CTCF G2GSE9613 1177721 1179720 1999 16507
CTCF G2GSE9613 1179982 1180776 794 14849
CTCF G2GSE9613 1183387 1185124 1737 10972
CTCF G2GSE9613 1188600 1189731 1131 6062
CTCF G2GSE9613 1190806 1193217 2411 3216
CTCF G2GSE9613 1193737 1194128 391 1295
CTCF G2GSE9613 1194458 1195202 744 398
H3ac HepG2E 1188042 1188860 818 6777
KLF4 hESGSE17917 1184183 1184579 396 10847
P300 T0-glioblastomaGSE21026 1175638 1176499 861 19159
P300 T0-glioblastomaGSE21026 1184149 1184603 454 10852
P300 T30-glioblastomaGSE21026 1175552 1176612 1060 19146
P300 T30-glioblastomaGSE21026 1184098 1184808 710 10775
Rb SenescentGSE19898 1186151 1186440 289 8932
Rb shRbQuiescentGSE19898 1180492 1180767 275 14598
TFAP2C MCF7GSE21234 1175407 1176604 1197 19222
TFAP2C MCF7GSE21234 1188810 1189346 536 6150
hScc1 BcellGSE12603 1178479 1178845 366 16566
hScc1 BcellGSE12603 1179184 1179801 617 15735
hScc1 BcellGSE12603 1184530 1185348 818 10289
hScc1 BcellGSE12603 1189320 1190109 789 5513
hScc1 BcellGSE12603 1192103 1192966 863 2693
hScc1 G2GSE9613 1178395 1179720 1325 16170
hScc1 G2GSE9613 1190778 1192134 1356 3772
p130 QuiescentGSE19898 1185789 1186188 399 9239
p130 QuiescentGSE19898 1192276 1192577 301 2801
p130 SenescentGSE19898 1185719 1186384 665 9176
p130 shRbSenescentGSE19898 1185673 1186189 516 9297
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP JurkatGSE17954 1199869 1201848 1979 0
CTCF G2GSE9613 1195759 1201452 5693 0
CTCF G2GSE9613 1205352 1211766 6414 0
CTCF G2GSE9613 1212063 1214550 2487 0
CTCF G2GSE9613 1214918 1215818 900 0
CTCF G2GSE9613 1216978 1218202 1224 0
CTCF G2GSE9613 1219130 1219795 665 0
CTCF G2GSE9613 1221648 1222036 388 0
CTCF G2GSE9613 1222308 1229604 7296 0
CTCF G2GSE9613 1230548 1232497 1949 0
ER MCF7GSE19013 1229118 1229722 604 0
ETS1 JurkatGSE17954 1200232 1201350 1118 0
GABP HepG2GSE8489 1207860 1209098 1238 0
H3ac HepG2E 1230409 1231211 802 0
PHF8 HeLaGSE20725 1231483 1233881 2398 0
Rb GrowingGSE19898 1217729 1217958 229 0
SRF GMOGSE8489 1208010 1208961 951 0
TAF HelaGSE8489 1220303 1221586 1283 0
TFAP2C MCF7GSE21234 1230282 1230813 531 0
hScc1 BcellGSE12603 1197052 1197349 297 0
hScc1 BcellGSE12603 1199251 1200067 816 0
hScc1 BcellGSE12603 1201217 1201452 235 0
hScc1 BcellGSE12603 1202205 1202492 287 0
hScc1 BcellGSE12603 1209616 1210152 536 0
hScc1 BcellGSE12603 1211493 1211843 350 0
hScc1 BcellGSE12603 1212092 1212702 610 0
hScc1 BcellGSE12603 1213264 1213627 363 0
hScc1 BcellGSE12603 1214270 1214550 280 0
hScc1 BcellGSE12603 1214989 1215818 829 0
hScc1 BcellGSE12603 1216907 1217452 545 0
hScc1 BcellGSE12603 1219130 1219403 273 0
hScc1 BcellGSE12603 1220074 1220425 351 0
hScc1 BcellGSE12603 1221497 1222624 1127 0
hScc1 BcellGSE12603 1223043 1223526 483 0
hScc1 BcellGSE12603 1224809 1225359 550 0
hScc1 BcellGSE12603 1225819 1226813 994 0
hScc1 BcellGSE12603 1227617 1228414 797 0
hScc1 BcellGSE12603 1229985 1230263 278 0
hScc1 BcellGSE12603 1231211 1232497 1286 0
hScc1 G2GSE9613 1196584 1198457 1873 0
hScc1 G2GSE9613 1198769 1200141 1372 0
hScc1 G2GSE9613 1206630 1207245 615 0
hScc1 G2GSE9613 1217834 1218202 368 0
hScc1 G2GSE9613 1230609 1232497 1888 0
p63 keratinocytesGSE17611 1215099 1215875 776 0
Validated miRNA targets Top
Micro RNA Name Stem Loop Name The chromosome that miRNA located Publication
hsa-miR-137 hsa-mir-137 1 21278922
No data
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
19305 mRNA LOC285463 chr4 1193737 1202209 605 mRNA CTBP1 chr4 1195057 1232738Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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