AutismKB 2.0

Annotation Detail for GLIS1


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Basic Information Top
Gene Symbol:GLIS1 ( FLJ36155 )
Gene Full Name: GLIS family zinc finger 1
Band: 1p32.3
Quick LinksEntrez ID:148979; OMIM: 610378; Uniprot ID:GLIS1_HUMAN; ENSEMBL ID: ENSG00000174332; HGNC ID: 29525
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
356Bipartite nuclear localization signal
Location(AA) Modifications Resource
Location(AA) Modification Resource
33O-linkedHMM predict
74Phosphoserine(MAPK)HMM predict
74O-linkedHMM predict
74O-linkedHMM predict
74Phosphoserine(CDK)HMM predict
74Phosphoserine(CDC2)HMM predict
78O-linkedHMM predict
79Phosphoserine(IKK)HMM predict
88Phosphoserine(CK1)HMM predict
88O-linkedHMM predict
96Phosphoserine(IKK)HMM predict
96O-linkedHMM predict
119MethylarginineHMM predict
129PhosphoserineHMM predict
129Phosphoserine(CK1)HMM predict
143Phosphoserine(PKA)HMM predict
171Phosphoserine(ATM)HMM predict
171O-linkedHMM predict
236S-palmitoylHMM predict
305N-linkedHMM predict
334Phosphothreonine(PKA)HMM predict
406O-linkedHMM predict
460Phosphoserine(CDC2)HMM predict
464Phosphoserine(CDC2)HMM predict
478O-linkedHMM predict
478O-linkedHMM predict
478Phosphoserine(ATM)HMM predict
482Phosphoserine(CDK)HMM predict
482Phosphoserine(IKK)HMM predict
482Phosphoserine(CDC2)HMM predict
510Phosphoserine(CDC2)HMM predict
510O-linkedHMM predict
520Phosphoserine(IKK)HMM predict
562O-linkedHMM predict
563O-linkedHMM predict
580O-linkedHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_147193
  • Location:chr1 53744493-53972464
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 53976080 53977850 1770 4501
Fos K562GSE19551 53977233 53977831 598 5068
H3K27me3 colorectalcancer 53971189 53974488 3299 374
H3K27me3 colorectalcancer 53974758 53975751 993 2790
H3K27me3 colorectalcancer 53979162 53979738 576 6986
Myc hESGSE17917 53977122 53977526 404 4860
hScc1 BcellGSE12603 53976354 53977886 1532 4656
hScc1 BcellGSE12603 53986117 53986341 224 13765
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 53739964 53740216 252 4404
CTCF G2GSE9613 53743018 53743401 383 1284
Oct1 HelaGSE14283 53744212 53744242 30 267
hScc1 BcellGSE12603 53728680 53729442 762 15433
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 53920482 53920770 288 0
CTCF CD4SISSRdata 53920482 53920770 288 0
CTCF G2GSE9613 53755459 53755670 211 0
CTCF G2GSE9613 53762035 53762257 222 0
CTCF G2GSE9613 53764470 53765428 958 0
CTCF G2GSE9613 53769739 53770750 1011 0
CTCF G2GSE9613 53771730 53772058 328 0
CTCF G2GSE9613 53773696 53773894 198 0
CTCF G2GSE9613 53777155 53777448 293 0
CTCF G2GSE9613 53792380 53793041 661 0
CTCF G2GSE9613 53797643 53797891 248 0
CTCF G2GSE9613 53800618 53800912 294 0
CTCF G2GSE9613 53830847 53831149 302 0
CTCF G2GSE9613 53832345 53833401 1056 0
CTCF G2GSE9613 53843492 53843715 223 0
CTCF G2GSE9613 53844496 53845191 695 0
CTCF G2GSE9613 53864941 53865306 365 0
CTCF G2GSE9613 53876599 53876929 330 0
CTCF G2GSE9613 53877454 53877808 354 0
CTCF G2GSE9613 53896622 53896961 339 0
CTCF G2GSE9613 53913863 53914196 333 0
CTCF G2GSE9613 53920313 53920593 280 0
CTCF G2GSE9613 53922264 53922563 299 0
CTCF G2GSE9613 53924002 53924400 398 0
CTCF G2GSE9613 53926846 53927765 919 0
CTCF G2GSE9613 53929465 53929718 253 0
CTCF G2GSE9613 53931642 53931795 153 0
CTCF G2GSE9613 53942766 53943054 288 0
CTCF G2GSE9613 53950937 53951348 411 0
CTCF G2GSE9613 53953477 53954223 746 0
CTCF G2GSE9613 53963580 53963903 323 0
FoxA1 MCF7MACSdata 53830957 53831184 227 0
FoxA1 MCF7MACSdata 53872213 53872411 198 0
Nanog hESGSE18292 53873009 53873496 487 0
Oct1 HelaGSE14283 53846708 53846747 39 0
Oct1 HelaGSE14283 53846821 53846856 35 0
Oct1 HelaGSE14283 53847294 53847324 30 0
Oct1 HelaGSE14283 53907765 53907820 55 0
Oct1 HelaGSE14283 53945269 53945306 37 0
P300 T0-glioblastomaGSE21026 53749983 53750535 552 0
P300 T0-glioblastomaGSE21026 53810424 53811555 1131 0
P300 T30-glioblastomaGSE21026 53779925 53781149 1224 0
P300 T30-glioblastomaGSE21026 53810431 53811449 1018 0
Rb QuiescentGSE19898 53764944 53765115 171 0
Rb QuiescentGSE19898 53879933 53880072 139 0
TFAP2C MCF7GSE21234 53750119 53750685 566 0
TFAP2C MCF7GSE21234 53757106 53757472 366 0
TFAP2C MCF7GSE21234 53771170 53771864 694 0
TFAP2C MCF7GSE21234 53831865 53832334 469 0
hScc1 BcellGSE12603 53744842 53745155 313 0
hScc1 BcellGSE12603 53752990 53753135 145 0
hScc1 BcellGSE12603 53755848 53756474 626 0
hScc1 BcellGSE12603 53763919 53764121 202 0
hScc1 BcellGSE12603 53764975 53765536 561 0
hScc1 BcellGSE12603 53767625 53767979 354 0
hScc1 BcellGSE12603 53768453 53769163 710 0
hScc1 BcellGSE12603 53771466 53772035 569 0
hScc1 BcellGSE12603 53772958 53773248 290 0
hScc1 BcellGSE12603 53782640 53783009 369 0
hScc1 BcellGSE12603 53785593 53785879 286 0
hScc1 BcellGSE12603 53814140 53814726 586 0
hScc1 BcellGSE12603 53825189 53825492 303 0
hScc1 BcellGSE12603 53830651 53830949 298 0
hScc1 BcellGSE12603 53832193 53832772 579 0
hScc1 BcellGSE12603 53839755 53840604 849 0
hScc1 BcellGSE12603 53843691 53844758 1067 0
hScc1 BcellGSE12603 53880134 53880482 348 0
hScc1 BcellGSE12603 53890221 53890618 397 0
hScc1 BcellGSE12603 53896149 53896335 186 0
hScc1 BcellGSE12603 53901286 53901523 237 0
hScc1 BcellGSE12603 53904061 53904191 130 0
hScc1 BcellGSE12603 53907330 53907537 207 0
hScc1 BcellGSE12603 53910919 53911254 335 0
hScc1 BcellGSE12603 53913863 53914196 333 0
hScc1 BcellGSE12603 53920276 53920698 422 0
hScc1 BcellGSE12603 53923160 53923376 216 0
hScc1 BcellGSE12603 53924002 53924514 512 0
hScc1 BcellGSE12603 53926061 53926424 363 0
hScc1 BcellGSE12603 53926809 53927166 357 0
hScc1 BcellGSE12603 53929465 53930008 543 0
hScc1 BcellGSE12603 53933776 53933972 196 0
hScc1 BcellGSE12603 53934716 53934944 228 0
hScc1 BcellGSE12603 53941922 53942139 217 0
hScc1 BcellGSE12603 53944006 53944218 212 0
hScc1 G2GSE9613 53877454 53877844 390 0
p63 keratinocytesGSE17611 53897066 53897845 779 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
810 mRNA chr1 53773412 53775062 1650 mRNA GLIS1 chr1 53683926 53911898 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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