Annotation Detail for CTGF
Basic Information Top
| Gene Symbol: | CTGF ( CCN2,HCS24,IGFBP8,MGC102839,NOV2 ) |
|---|---|
| Gene Full Name: | connective tissue growth factor |
| Band: | 6q23.2 |
| Quick Links | Entrez ID:1490; OMIM: 121009; Uniprot ID:CTGF_HUMAN; ENSEMBL ID: ENSG00000118523; HGNC ID: 2500 |
| Relate to Another Database: | SFARIGene; denovo-db |
| Location(AA) | Modification | |
|---|---|---|
| 28 | N-linked (GlcNAc...) (Potential). | |
| 225 | N-linked (GlcNAc...) (Potential). | |
| Location(AA) | Modifications | Resource |
|---|---|---|
| 28 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| 225 | N-linked (GlcNAc...) (Potential). | Swiss-Prot 53.0 |
| Location(AA) | Modification | Resource |
|---|---|---|
| 28 | N-linked | HMM predict |
| 54 | S-palmitoyl | HMM predict |
| 57 | S-palmitoyl | HMM predict |
| 206 | C-linked | HMM predict |
| 210 | O-linked | HMM predict |
| 222 | Phosphothreonine(PKA) | HMM predict |
| 271 | Phosphoserine(CK2) | HMM predict |
| 325 | S-palmitoyl | HMM predict |
| 341 | Phosphotyrosine(INSR) | HMM predict |
| 345 | Phosphotyrosine(INSR) | HMM predict |
- RefSeq ID: NM_001901
- Location:chr6 132311011-132314210
- strand:-
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| SRF | Hela | GSE8489 | 132316641 | 132319128 | 2487 | 3674 |
| TFAP2C | MCF7 | GSE21234 | 132314129 | 132314439 | 310 | 74 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| Oct1 | H2O2-Hela | GSE14283 | 132306317 | 132306355 | 38 | 4676 |
| Oct1 | Hela | GSE14283 | 132306317 | 132306354 | 37 | 4676 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 132312715 | 132314286 | 1571 | 0 |
| H3ac | HepG2 | E | 132312757 | 132313332 | 575 | 0 |
| hScc1 | Bcell | GSE12603 | 132313633 | 132314104 | 471 | 0 |
| hScc1 | G2 | GSE9613 | 132313225 | 132314286 | 1061 | 0 |
| Micro RNA Name | Stem Loop Name | The chromosome that miRNA located | Publication |
|---|---|---|---|
| hsa-miR-1 | hsa-mir-1-2 | 18 | 15685193 |
| hsa-miR-1 | hsa-mir-1-1 | 20 | 15685193 |
| hsa-miR-124 | hsa-mir-124-1 | 8 | 15685193 |
| hsa-miR-124 | hsa-mir-124-2 | 8 | 15685193 |
| hsa-miR-124 | hsa-mir-124-3 | 20 | 15685193 |
| hsa-miR-125a-3p | hsa-mir-125a | 19 | 16331254 |
| hsa-miR-125a-5p | hsa-mir-125a | 19 | 16331254 |
| hsa-miR-133a | hsa-mir-133a-1 | 18 | 20056941 |
| hsa-miR-133a | hsa-mir-133a-2 | 20 | 20056941 |
| hsa-miR-133b | hsa-mir-133b | 6 | 19096030 |
| hsa-miR-133b | hsa-mir-133b | 6 | 20056941 |
| hsa-miR-17 | hsa-mir-17 | 13 | 16878133 |
| hsa-miR-17* | hsa-mir-17 | 13 | 16878133 |
| hsa-miR-18a | hsa-mir-18a | 13 | 19233176 |
| hsa-miR-18a* | hsa-mir-18a | 13 | 19233176 |
| hsa-miR-192 | hsa-mir-192 | 11 | 20393144 |
| hsa-miR-192* | hsa-mir-192 | 11 | 20393144 |
| hsa-miR-195 | hsa-mir-195 | 17 | 16331254 |
| hsa-miR-195* | hsa-mir-195 | 17 | 16331254 |
| hsa-miR-200a | hsa-mir-200a | 1 | 16331254 |
| hsa-miR-200a* | hsa-mir-200a | 1 | 16331254 |
| hsa-miR-215 | hsa-mir-215 | 1 | 20393144 |
| hsa-miR-224 | hsa-mir-224 | X | 16331254 |
| hsa-miR-26a | hsa-mir-26a-1 | 3 | 18713946 |
| hsa-miR-26a | hsa-mir-26a-2 | 12 | 18713946 |
| hsa-miR-26a-1* | hsa-mir-26a-1 | 3 | 18713946 |
| hsa-miR-30c | hsa-mir-30c-2 | 6 | 19096030 |
| hsa-miR-30c | hsa-mir-30c-1 | 1 | 19096030 |
| hsa-miR-373 | hsa-mir-373 | 19 | 15685193 |
| hsa-miR-373* | hsa-mir-373 | 19 | 15685193 |
| hsa-miR-675 | hsa-mir-675 | 11 | 18587395 |
| hsa-miR-92a | hsa-mir-92a-1 | 13 | 16878133 |
| hsa-miR-92a | hsa-mir-92a-2 | X | 16878133 |
| ID in Tarbase | Data Type | Support Type | miRNA | Gene | Direct Support | Publication |
|---|---|---|---|---|---|---|
| 273 | Unknown | MicroArray | miR-124 | CTGF | n_a | 15685193 |
| Ensembl | Protein Type | Differentially expressed in | Pathology or Event | Mis Regulation | Gene Expression | Tumour Involvement |
| ENSG00000118523 | G1-to-S transition | n_a | n_a | n_a | n_a |
Cis-Nats regulation