Annotation Detail for CNIH3
Basic Information Top
| Gene Symbol: | CNIH3 ( CNIH-3,FLJ38993 ) |
|---|---|
| Gene Full Name: | cornichon homolog 3 (Drosophila) |
| Band: | 1q42.12 |
| Quick Links | Entrez ID:149111; OMIM: NA; Uniprot ID:CNIH3_HUMAN; ENSEMBL ID: ENSG00000143786; HGNC ID: 26802 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 117 | Phosphotyrosine(INSR) | HMM predict |
| 117 | Phosphotyrosine(SRC) | HMM predict |
- RefSeq ID: NM_152495
- Location:chr1 222870801-222994871
- strand:+
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| H3K27me3 | colorectal | cancer | 222869486 | 222870252 | 766 | 933 |
| Rb | Senescent | GSE19898 | 222870152 | 222870597 | 445 | 427 |
| hScc1 | Bcell | GSE12603 | 222870343 | 222870693 | 350 | 284 |
| p130 | Senescent | GSE19898 | 222870109 | 222870625 | 516 | 435 |
| p130 | shRbSenescent | GSE19898 | 222870132 | 222870614 | 482 | 429 |
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CBP | T30-glioblastoma | GSE21026 | 222877471 | 222878856 | 1385 | 0 |
| CBP | T30-glioblastoma | GSE21026 | 222980720 | 222981672 | 952 | 0 |
| CTCF | CD4 | GSE12889 | 222899006 | 222899287 | 281 | 0 |
| CTCF | CD4 | SISSRdata | 222899006 | 222899287 | 281 | 0 |
| CTCF | Jurkat | GSE12889 | 222898963 | 222899202 | 239 | 0 |
| CTCF | G2 | GSE9613 | 222871717 | 222872160 | 443 | 0 |
| CTCF | G2 | GSE9613 | 222898837 | 222899168 | 331 | 0 |
| CTCF | G2 | GSE9613 | 222901952 | 222902224 | 272 | 0 |
| CTCF | G2 | GSE9613 | 222958459 | 222958674 | 215 | 0 |
| CTCF | G2 | GSE9613 | 222976058 | 222976367 | 309 | 0 |
| FOXA1 | MCF7 | GSE15244 | 222876490 | 222877010 | 520 | 0 |
| H3K27me3 | colorectal | cancer | 222871915 | 222873223 | 1308 | 0 |
| NFkBII | GM12878 | GSE19485 | 222990483 | 222991951 | 1468 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 222877370 | 222878929 | 1559 | 0 |
| P300 | T30-glioblastoma | GSE21026 | 222980827 | 222981846 | 1019 | 0 |
| RARA | MCF7 | GSE15244 | 222930827 | 222931290 | 463 | 0 |
| RARG | MCF7 | GSE15244 | 222930827 | 222931290 | 463 | 0 |
| Rb | Growing | GSE19898 | 222898963 | 222899210 | 247 | 0 |
| Rb | Quiescent | GSE19898 | 222981239 | 222981404 | 165 | 0 |
| Rb | Senescent | GSE19898 | 222877548 | 222877805 | 257 | 0 |
| TFAP2C | MCF7 | GSE21234 | 222938423 | 222938739 | 316 | 0 |
| TFAP2C | MCF7 | GSE21234 | 222986605 | 222987326 | 721 | 0 |
| hScc1 | Bcell | GSE12603 | 222898909 | 222899233 | 324 | 0 |
| hScc1 | Bcell | GSE12603 | 222935589 | 222935981 | 392 | 0 |
| hScc1 | CdLS | GSE12603 | 222898837 | 222899445 | 608 | 0 |
| hScc1 | CdLS | GSE12603 | 222954983 | 222955551 | 568 | 0 |
| p130 | Quiescent | GSE19898 | 222878749 | 222878989 | 240 | 0 |
| p130 | Quiescent | GSE19898 | 222980692 | 222980976 | 284 | 0 |
| p130 | Senescent | GSE19898 | 222877558 | 222878429 | 871 | 0 |
| p130 | shRbQuiescent | GSE19898 | 222878498 | 222878830 | 332 | 0 |
| p130 | shRbSenescent | GSE19898 | 222981340 | 222981606 | 266 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2401 | mRNA | CNIH3 | chr1 | 221110913 | 221234984 | 113 | EST | chr1 | 221211940 | 221225100 | Sense/Antisense (SA) pairs | |