AutismKB 2.0

Annotation Detail for SHISA4


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Basic Information Top
Gene Symbol:SHISA4 ( C1orf40,FLJ18233,MGC102893,MGC129812,MGC129813,TMEM58 )
Gene Full Name: shisa homolog 4 (Xenopus laevis)
Band: 1q32.1
Quick LinksEntrez ID:149345; OMIM: NA; Uniprot ID:SHSA4_HUMAN; ENSEMBL ID: ENSG00000198892; HGNC ID: 27139
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_198149
  • Location:chr1 200124654-200128048
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 200124419 200124819 400 36
H3K27me3 colorectalcancer 200122169 200123827 1658 1657
hScc1 BcellGSE12603 200123750 200124668 918 446
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
TFAP2C MCF7GSE21234 200129073 200129733 660 1355
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
H3K27me3 colorectalcancer 200126252 200126872 620 0
Validated miRNA targets Top
Cis-Nats regulation Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018