AutismKB 2.0

Annotation Detail for CTNNA1


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Basic Information Top
Gene Symbol:CTNNA1 ( CAP102,FLJ36832,FLJ52416 )
Gene Full Name: catenin (cadherin-associated protein), alpha 1, 102kDa
Band: 5q31.2
Quick LinksEntrez ID:1495; OMIM: 116805; Uniprot ID:CTNA1_HUMAN; ENSEMBL ID: ENSG00000044115; HGNC ID: 2509
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
2N-acetylthreonine.
177Phosphotyrosine.
186N6-acetyllysine.
619Phosphotyrosine.
641Phosphoserine.
645Phosphothreonine.
652Phosphoserine.
654Phosphothreonine.
655Phosphoserine.
658Phosphothreonine.
Location(AA) Modifications Resource
641Phosphoserine.Swiss-Prot 53.0
641PhosphoserinePhospho.ELM 6.0
652Phosphoserine (By similarity).Swiss-Prot 53.0
654Phosphothreonine (By similarity).Swiss-Prot 53.0
655Phosphoserine (By similarity).Swiss-Prot 53.0
658Phosphothreonine (By similarity).Swiss-Prot 53.0
Location(AA) Modification Resource
118Phosphoserine(CK1)HMM predict
268Phosphoserine(ATM)HMM predict
268Phosphoserine(CK1)HMM predict
351Phosphotyrosine(INSR)HMM predict
375Phosphothreonine(PKA)HMM predict
393Phosphoserine(IKK)HMM predict
441Phosphoserine(CK2)HMM predict
453Phosphoserine(PKA)HMM predict
455Phosphoserine(PKG)HMM predict
455Phosphoserine(ATM)HMM predict
563Phosphotyrosine(INSR)HMM predict
568Phosphotyrosine(Abl)HMM predict
641Phosphoserine(CK2)HMM predict
641Phosphoserine(ATM)HMM predict
655Phosphoserine(CK2)HMM predict
655Phosphoserine(PKG)HMM predict
658Phosphothreonine(CK2)HMM predict
696Phosphoserine(CK1)HMM predict
738N-linkedHMM predict
817Phosphoserine(CK1)HMM predict
832Phosphothreonine(PKC)HMM predict
836Phosphoserine(PKG)HMM predict
894ValineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001903
  • Location:chr5 138117005-138298620
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 138101177 138101434 257 15700
Fos K562GSE19551 138112142 138112760 618 4555
TFAP2C MCF7GSE21234 138108887 138109302 415 7911
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 138300149 138300446 297 1677
CTCF G2GSE9613 138301109 138301953 844 2911
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 138117047 138117517 470 0
CTCF G2GSE9613 138153605 138153842 237 0
CTCF G2GSE9613 138274254 138274519 265 0
CTCF G2GSE9613 138296026 138296376 350 0
KLF4 hESGSE17917 138260871 138261032 161 0
Oct1 H2O2-HelaGSE14283 138127749 138127776 27 0
Oct1 HelaGSE14283 138154068 138154131 63 0
Oct1 HelaGSE14283 138194108 138194162 54 0
Oct4 hESGSE17917 138260867 138261019 152 0
PHF8 293TGSE20725 138116450 138117846 1396 0
TAF HelaGSE8489 138117941 138118333 392 0
TAF k562GSE8489 138117591 138118333 742 0
p130 SenescentGSE19898 138117016 138117173 157 0
p130 SenescentGSE19898 138278921 138279079 158 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
21525 mRNA CTNNA1 chr5 138117005 138298621 5931 mRNA LRRTM2 chr5 138232977 138238908 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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