AutismKB 2.0

Annotation Detail for CTNNA2


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Basic Information Top
Gene Symbol:CTNNA2 ( CAP-R,CAPR,CT114,CTNR,DKFZp686H02198 )
Gene Full Name: catenin (cadherin-associated protein), alpha 2
Band: 2p12
Quick LinksEntrez ID:1496; OMIM: 114025; Uniprot ID:CTNA2_HUMAN; ENSEMBL ID: ENSG00000066032; HGNC ID: 2510
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
2N-acetylthreonine (By similarity).
5Phosphothreonine (By similarity).
6Phosphoserine (By similarity).
151Phosphoserine.
261Phosphothreonine (By similarity).
262Phosphoserine (By similarity).
640Phosphoserine (By similarity).
653Phosphothreonine (By similarity).
654Phosphoserine (By similarity).
657Phosphothreonine (By similarity).
889N6-acetyllysine.
901Phosphoserine (By similarity).
Location(AA) Modifications Resource
2N-acetylthreonine (By similarity).Swiss-Prot 53.0
5Phosphothreonine (By similarity).Swiss-Prot 53.0
6Phosphoserine (By similarity).Swiss-Prot 53.0
261Phosphothreonine (By similarity).Swiss-Prot 53.0
262Phosphoserine (By similarity).Swiss-Prot 53.0
640Phosphoserine (By similarity).Swiss-Prot 53.0
654Phosphoserine (By similarity).Swiss-Prot 53.0
657Phosphothreonine (By similarity).Swiss-Prot 53.0
901Phosphoserine (By similarity).Swiss-Prot 53.0
Location(AA) Modification Resource
36O-linkedHMM predict
40N-linkedHMM predict
43N-linkedHMM predict
117Phosphoserine(CK1)HMM predict
122Phosphothreonine(PKA)HMM predict
122Phosphothreonine(PKC)HMM predict
165N-linkedHMM predict
168N-linkedHMM predict
216N-linkedHMM predict
261O-linkedHMM predict
262Phosphoserine(CDC2)HMM predict
349Phosphotyrosine(INSR)HMM predict
351N-linkedHMM predict
352N-linkedHMM predict
373Phosphothreonine(PKA)HMM predict
439Phosphoserine(CK2)HMM predict
468Phosphothreonine(PKC)HMM predict
475Phosphoserine(IKK)HMM predict
511Phosphoserine(CK2)HMM predict
566Phosphotyrosine(Abl)HMM predict
640Phosphoserine(CK2)HMM predict
647Phosphotyrosine(Syk)HMM predict
647Phosphotyrosine(INSR)HMM predict
654Phosphoserine(PKG)HMM predict
654Phosphoserine(CK2)HMM predict
657Phosphothreonine(CK2)HMM predict
737N-linkedHMM predict
743N-linkedHMM predict
854Phosphoserine(ATM)HMM predict
857Phosphoserine(IKK)HMM predict
864Phosphoserine(CK1)HMM predict
879Phosphothreonine(PKC)HMM predict
883Phosphoserine(PKG)HMM predict
890Phosphotyrosine(Syk)HMM predict
901Phosphoserine(MAPK)HMM predict
933Phosphoserine(PKC)HMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_004389
  • Location:chr2 79593633-80729414
  • strand:+
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 79593314 79593753 439 100
H3K4me3 colorectalcancer 79592676 79593130 454 731
Myc K562GSE19551 79591993 79592340 347 1467
NRSF JurkatGSE13047 79591528 79593823 2295 958
NRSF mAbJurkat 79590580 79593281 2701 1703
NRSF-mono JurkatQuESTdata 79591641 79593799 2158 914
NRSF-poly JurkatQuESTdata 79591756 79592928 1172 1292
hScc1 BcellGSE12603 79593209 79593519 310 270
No data
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CBP JurkatGSE17954 80073117 80075725 2608 0
CBP T0-glioblastomaGSE21026 79915923 79916341 418 0
CBP T0-glioblastomaGSE21026 80312799 80313029 230 0
CBP T0-glioblastomaGSE21026 80676753 80677307 554 0
CBP T30-glioblastomaGSE21026 79803776 79805172 1396 0
CTCF CD4GSE12889 79968519 79968631 112 0
CTCF CD4SISSRdata 79968519 79968631 112 0
CTCF HelaGSE12889 79941209 79941438 229 0
CTCF HelaGSE12889 80153775 80153980 205 0
CTCF G2GSE9613 79602406 79602589 183 0
CTCF G2GSE9613 79710227 79710363 136 0
CTCF G2GSE9613 79910915 79911154 239 0
CTCF G2GSE9613 79941216 79941507 291 0
CTCF G2GSE9613 79957099 79957365 266 0
CTCF G2GSE9613 80016537 80017340 803 0
CTCF G2GSE9613 80319238 80319372 134 0
CTCF G2GSE9613 80403097 80403495 398 0
CTCF G2GSE9613 80533556 80533816 260 0
CTCF G2GSE9613 80579618 80579901 283 0
ER E2-MCF7GSE14664 80566667 80566702 35 0
ER E2-MCF7GSE14664 80591379 80591417 38 0
ER Fulvestrant-MCF7GSE14664 80084623 80084666 43 0
ER Fulvestrant-MCF7GSE14664 80496838 80496874 36 0
ER Fulvestrant-MCF7GSE14664 80566668 80566703 35 0
ER Fulvestrant-MCF7GSE14664 80575549 80575585 36 0
ER Fulvestrant-MCF7GSE14664 80591374 80591413 39 0
Fos K562GSE19551 80392895 80393258 363 0
FoxA1 MCF7MACSdata 80594774 80594928 154 0
H3K27me3 colorectalcancer 80385690 80386241 551 0
Myc K562GSE19551 80113406 80113581 175 0
NFkBII GM12878GSE19485 80605012 80607002 1990 0
Nanog ESGSE20650 79863167 79863631 464 0
Nanog ESGSE20650 79913104 79913625 521 0
Nanog ESGSE20650 80088706 80089373 667 0
Nanog ESGSE20650 80216855 80217409 554 0
Nanog hESGSE18292 79863197 79863585 388 0
Nanog hESGSE18292 80088698 80089471 773 0
Nanog hESGSE18292 80216905 80217308 403 0
Nanog hESGSE18292 80444914 80445643 729 0
Oct1 H2O2-HelaGSE14283 79938999 79939028 29 0
Oct1 H2O2-HelaGSE14283 80058636 80058667 31 0
Oct1 H2O2-HelaGSE14283 80084633 80084661 28 0
Oct1 H2O2-HelaGSE14283 80093149 80093177 28 0
Oct1 H2O2-HelaGSE14283 80252313 80252342 29 0
Oct1 H2O2-HelaGSE14283 80323091 80323123 32 0
Oct1 H2O2-HelaGSE14283 80378710 80378737 27 0
Oct1 H2O2-HelaGSE14283 80484944 80484978 34 0
Oct1 H2O2-HelaGSE14283 80556655 80556686 31 0
Oct1 H2O2-HelaGSE14283 80566816 80566844 28 0
Oct1 HelaGSE14283 79594256 79594288 32 0
Oct1 HelaGSE14283 79611222 79611250 28 0
Oct1 HelaGSE14283 79718931 79718969 38 0
Oct1 HelaGSE14283 79938998 79939032 34 0
Oct1 HelaGSE14283 79963368 79963400 32 0
Oct1 HelaGSE14283 79977797 79977833 36 0
Oct1 HelaGSE14283 80058637 80058666 29 0
Oct1 HelaGSE14283 80065094 80065166 72 0
Oct1 HelaGSE14283 80084619 80084666 47 0
Oct1 HelaGSE14283 80093150 80093178 28 0
Oct1 HelaGSE14283 80129654 80129702 48 0
Oct1 HelaGSE14283 80146797 80146826 29 0
Oct1 HelaGSE14283 80182050 80182079 29 0
Oct1 HelaGSE14283 80292758 80292787 29 0
Oct1 HelaGSE14283 80335011 80335044 33 0
Oct1 HelaGSE14283 80340073 80340109 36 0
Oct1 HelaGSE14283 80453459 80453488 29 0
Oct1 HelaGSE14283 80484944 80484984 40 0
Oct1 HelaGSE14283 80496843 80496874 31 0
Oct1 HelaGSE14283 80503427 80503494 67 0
Oct1 HelaGSE14283 80556655 80556685 30 0
Oct1 HelaGSE14283 80691068 80691144 76 0
Oct4 ESGSE20650 79863145 79863519 374 0
Oct4 hESGSE17917 79863243 79863562 319 0
P300 T0-glioblastomaGSE21026 80312446 80313029 583 0
P300 T0-glioblastomaGSE21026 80676571 80677022 451 0
P300 T30-glioblastomaGSE21026 79797740 79798898 1158 0
P300 T30-glioblastomaGSE21026 79804154 79805260 1106 0
SRF GMOGSE8489 79617612 79617905 293 0
Stat6 IL-4-hr4GSE17850 79954684 79955233 549 0
TAF HelaGSE8489 79827048 79827223 175 0
TAF HelaGSE8489 80594448 80594711 263 0
TAF k562GSE8489 79821951 79822275 324 0
TAF k562GSE8489 80182722 80183106 384 0
TAF k562GSE8489 80243605 80243815 210 0
TAF k562GSE8489 80486196 80486682 486 0
TAF k562GSE8489 80594448 80594738 290 0
TFAP2C MCF7GSE21234 80036542 80037011 469 0
TFAP2C MCF7GSE21234 80134822 80135421 599 0
USF1 HepG2E 79835965 79836694 729 0
USF1 HepG2E 80720199 80720431 232 0
hScc1 BcellGSE12603 79968504 79968928 424 0
hScc1 BcellGSE12603 80579866 80580109 243 0
hScc1 CdLSGSE12603 79968365 79968892 527 0
hScc1 CdLSGSE12603 80579550 80580109 559 0
hScc1 G2GSE9613 79941148 79941580 432 0
hScc1 G2GSE9613 79968332 79968928 596 0
p130 QuiescentGSE19898 80182788 80182915 127 0
p130 SenescentGSE19898 80182513 80182818 305 0
p63 keratinocytesGSE17611 80628821 80629544 723 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
14531 mRNA CTNNA2 chr2 80452161 80787563 41426 EST chr2 80713895 80755321 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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