Annotation Detail for FAM71A
Basic Information Top
| Gene Symbol: | FAM71A ( FLJ32796,RP11-338C15.4 ) |
|---|---|
| Gene Full Name: | family with sequence similarity 71, member A |
| Band: | 1q32.3 |
| Quick Links | Entrez ID:149647; OMIM: NA; Uniprot ID:FA71A_HUMAN; ENSEMBL ID: ENSG00000162771; HGNC ID: 26541 |
| Relate to Another Database: | SFARIGene; denovo-db |
| No data |
| No data |
| Location(AA) | Modification | Resource |
|---|---|---|
| 22 | N-linked | HMM predict |
| 105 | Phosphothreonine(PKC) | HMM predict |
| 181 | N-linked | HMM predict |
| 204 | Phosphoserine(CK1) | HMM predict |
| 256 | N-linked | HMM predict |
| 258 | O-linked | HMM predict |
| 291 | O-linked | HMM predict |
| 309 | O-linked | HMM predict |
| 324 | O-linked | HMM predict |
| 338 | N-linked | HMM predict |
| 352 | O-linked | HMM predict |
| 357 | O-linked | HMM predict |
| 361 | Phosphoserine(CK1) | HMM predict |
| 396 | O-linked | HMM predict |
| 396 | O-linked | HMM predict |
| 403 | Phosphoserine(CK1) | HMM predict |
| 405 | Phosphoserine(ATM) | HMM predict |
| 413 | Phosphothreonine(PKA) | HMM predict |
| 442 | Phosphothreonine(PKA) | HMM predict |
| 442 | Phosphothreonine(PKC) | HMM predict |
| 483 | Phosphoserine(CDK) | HMM predict |
| 496 | Phosphothreonine(CDC2) | HMM predict |
| 505 | Phosphoserine(CK1) | HMM predict |
| 515 | O-linked | HMM predict |
| 536 | N-linked | HMM predict |
| 588 | O-linked | HMM predict |
- RefSeq ID: NM_153606
- Location:chr1 210864438-210866736
- strand:+
| No data |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CBP | Jurkat | GSE17954 | 210875076 | 210879590 | 4514 | 10597 |
| CTCF | CD4 | GSE12889 | 210870109 | 210870295 | 186 | 3466 |
| CTCF | CD4 | SISSRdata | 210870109 | 210870295 | 186 | 3466 |
| CTCF | G2 | GSE9613 | 210870022 | 210870550 | 528 | 3550 |
| Nanog | hES | GSE18292 | 210875293 | 210875482 | 189 | 8651 |
| hScc1 | Bcell | GSE12603 | 210869894 | 210870432 | 538 | 3427 |
| hScc1 | CdLS | GSE12603 | 210869894 | 210870402 | 508 | 3412 |
| p130 | Senescent | GSE19898 | 210876608 | 210876938 | 330 | 10037 |
| Transcrip Factors | Experimental Cell | Database | TF Binding Start | TF Binding End | TF Binding Length | The Distance to Gene |
|---|---|---|---|---|---|---|
| CTCF | G2 | GSE9613 | 210864629 | 210864922 | 293 | 0 |
Validated miRNA targets| Cluster ID | Plue Type | Plus Gene Name | Plus Chromosome | Plus Start | Plus End | Overlap Length | Minus Type | Minus Gene Name | Minus Chromosome | Minus Star | Minus End | Type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2317 | mRNA | FLJ32796 | chr1 | 209186210 | 209188512 | 2035 | mRNA | chr1 | 209186020 | 209188508 | Sense/Antisense (SA) pairs | |