AutismKB 2.0

Annotation Detail for CTNND2


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:CTNND2 ( GT24,NPRAP )
Gene Full Name: catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)
Band: 5p15.2
Quick LinksEntrez ID:1501; OMIM: 604275; Uniprot ID:CTND2_HUMAN; ENSEMBL ID: ENSG00000169862; HGNC ID: 2516
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Location(AA) Modification
32Phosphoserine (By similarity).
267Phosphoserine (By similarity).
276Phosphoserine (By similarity).
415Phosphoserine (By similarity).
474Phosphoserine.
516Phosphotyrosine (By similarity).
534Phosphoserine (By similarity).
537Phosphoserine (By similarity).
1072Phosphoserine (By similarity).
1076Phosphoserine (By similarity).
1127Phosphoserine (By similarity).
Location(AA) Modifications Resource
32Phosphoserine (By similarity).Swiss-Prot 53.0
267Phosphoserine (By similarity).Swiss-Prot 53.0
276Phosphoserine (By similarity).Swiss-Prot 53.0
415Phosphoserine (By similarity).Swiss-Prot 53.0
474Phosphoserine (By similarity).Swiss-Prot 53.0
534Phosphoserine (By similarity).Swiss-Prot 53.0
537Phosphoserine (By similarity).Swiss-Prot 53.0
1072Phosphoserine (By similarity).Swiss-Prot 53.0
1076Phosphoserine (By similarity).Swiss-Prot 53.0
1127Phosphoserine (By similarity).Swiss-Prot 53.0
Location(AA) Modification Resource
22Phosphoserine(CK2)HMM predict
23Phosphoserine(CK2)HMM predict
25Phosphoserine(CK2)HMM predict
28O-linkedHMM predict
29Phosphoserine(IKK)HMM predict
43O-linkedHMM predict
43Phosphoserine(CK2)HMM predict
47O-linkedHMM predict
91Phosphoserine(IKK)HMM predict
97PhosphoserineHMM predict
142Phosphotyrosine(INSR)HMM predict
175N-linkedHMM predict
203O-linkedHMM predict
203Phosphoserine(ATM)HMM predict
255O-linkedHMM predict
257O-linkedHMM predict
258O-linkedHMM predict
267Phosphoserine(CDC2)HMM predict
267O-linkedHMM predict
276Phosphoserine(CDC2)HMM predict
285Phosphoserine(PKB)HMM predict
292Phosphotyrosine(Abl)HMM predict
298O-linkedHMM predict
299Phosphoserine(IKK)HMM predict
299Phosphoserine(CDC2)HMM predict
299Phosphoserine(PKB)HMM predict
299O-linkedHMM predict
303PhosphoserineHMM predict
303Phosphoserine(CDC2)HMM predict
312Phosphoserine(IKK)HMM predict
315Phosphoserine(CDC2)HMM predict
333O-linkedHMM predict
336O-linkedHMM predict
340O-linkedHMM predict
340O-linkedHMM predict
342O-linkedHMM predict
355O-linkedHMM predict
360Phosphoserine(CDC2)HMM predict
373Phosphoserine(CK1)HMM predict
398Phosphoserine(PKA)HMM predict
398Phosphoserine(CAMK2)HMM predict
401Phosphoserine(ATM)HMM predict
429Phosphotyrosine(EGFR)HMM predict
429Phosphotyrosine(Syk)HMM predict
438Phosphoserine(IKK)HMM predict
438Phosphoserine(ATM)HMM predict
440Phosphoserine(IKK)HMM predict
440Phosphoserine(ATM)HMM predict
455O-linkedHMM predict
456O-linkedHMM predict
456O-linkedHMM predict
460O-linkedHMM predict
461Phosphoserine(MAPK)HMM predict
461Phosphoserine(ATM)HMM predict
474Phosphoserine(ATM)HMM predict
499Phosphotyrosine(Syk)HMM predict
514Phosphoserine(CDC2)HMM predict
517O-linkedHMM predict
517Phosphoserine(IKK)HMM predict
534PhosphoserineHMM predict
534Phosphoserine(PKA)HMM predict
606Phosphothreonine(PKC)HMM predict
606Phosphothreonine(PKA)HMM predict
606Phosphothreonine(CDK)HMM predict
663N-linkedHMM predict
709Phosphoserine(ATM)HMM predict
714N-linkedHMM predict
721N-linkedHMM predict
758O-linkedHMM predict
758Phosphoserine(CK1)HMM predict
780Phosphoserine(ATM)HMM predict
948N-linkedHMM predict
949N-linkedHMM predict
1053Phosphoserine(CDK)HMM predict
1053Phosphoserine(CDK)HMM predict
1053O-linkedHMM predict
1056Phosphothreonine(MAPK)HMM predict
1056O-linkedHMM predict
1058Phosphoserine(IKK)HMM predict
1060Phosphoserine(CDC2)HMM predict
1068N-linkedHMM predict
1072O-linkedHMM predict
1072Phosphoserine(PKA)HMM predict
1072Phosphoserine(PKB)HMM predict
1076Phosphoserine(CDC2)HMM predict
1076Phosphoserine(IKK)HMM predict
1076PhosphoserineHMM predict
1096N-linkedHMM predict
1154SulfotyrosineHMM predict
1154Phosphotyrosine(Syk)HMM predict
1154Phosphotyrosine(INSR)HMM predict
1157Phosphotyrosine(Syk)HMM predict
1162N-linkedHMM predict
1166N-linkedHMM predict
1197Phosphotyrosine(INSR)HMM predict
1208SerineHMM predict
1212SulfotyrosineHMM predict
1217SulfotyrosineHMM predict
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_001332
  • Location:chr5 11024951-11957109
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF G2GSE9613 11956760 11957806 1046 174
H3K27me3 colorectalcancer 11957920 11958692 772 1197
hScc1 BcellGSE12603 11957235 11957724 489 370
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
ER MCF7GSE19013 11007730 11008403 673 16885
FoxA1 MCF7MACSdata 11011514 11011705 191 13342
TAF HelaGSE8489 11016909 11017328 419 7833
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 11040993 11041425 432 0
CTCF CD4SISSRdata 11040993 11041425 432 0
CTCF G2GSE9613 11040894 11041670 776 0
CTCF G2GSE9613 11047638 11047886 248 0
CTCF G2GSE9613 11064861 11065198 337 0
CTCF G2GSE9613 11128031 11128607 576 0
CTCF G2GSE9613 11175829 11176139 310 0
CTCF G2GSE9613 11235484 11236142 658 0
CTCF G2GSE9613 11320294 11320835 541 0
CTCF G2GSE9613 11437805 11438420 615 0
CTCF G2GSE9613 11535751 11536111 360 0
CTCF G2GSE9613 11547483 11547814 331 0
CTCF G2GSE9613 11695580 11695754 174 0
CTCF G2GSE9613 11733090 11733375 285 0
CTCF G2GSE9613 11773085 11773267 182 0
CTCF G2GSE9613 11869193 11870169 976 0
ER E2-MCF7GSE14664 11212598 11212631 33 0
ER MCF7GSE19013 11655116 11655771 655 0
FOXA1 MCF7GSE15244 11649682 11650426 744 0
FOXA1 MCF7GSE15244 11786658 11786948 290 0
FOXA1 MCF7GSE15244 11787560 11787782 222 0
FOXA1 MCF7GSE15244 11788377 11788596 219 0
FOXA1 MCF7GSE15244 11819095 11819393 298 0
FoxA1 MCF7MACSdata 11438489 11438653 164 0
FoxA1 MCF7MACSdata 11649797 11650103 306 0
FoxA1 MCF7MACSdata 11752233 11752450 217 0
FoxA1 MCF7MACSdata 11777878 11778421 543 0
FoxA1 MCF7MACSdata 11787482 11787801 319 0
FoxA1 MCF7MACSdata 11819208 11819444 236 0
FoxA1 MCF7MACSdata 11839058 11839270 212 0
FoxA1 MCF7MACSdata 11932939 11933115 176 0
GABP k562GSE8489 11539344 11539559 215 0
H3K27me3 colorectalcancer 11954915 11956584 1669 0
Nanog ESGSE20650 11438985 11439617 632 0
Nanog ESGSE20650 11673278 11673682 404 0
Nanog ESGSE20650 11844850 11845222 372 0
Nanog hESGSE18292 11438565 11439640 1075 0
Nanog hESGSE18292 11719733 11719917 184 0
Nanog hESGSE18292 11773141 11773357 216 0
Oct1 H2O2-HelaGSE14283 11114114 11114156 42 0
Oct1 H2O2-HelaGSE14283 11183443 11183472 29 0
Oct1 H2O2-HelaGSE14283 11308106 11308158 52 0
Oct1 H2O2-HelaGSE14283 11668490 11668530 40 0
Oct1 H2O2-HelaGSE14283 11863624 11863653 29 0
Oct1 H2O2-HelaGSE14283 11894419 11894459 40 0
Oct1 HelaGSE14283 11114118 11114156 38 0
Oct1 HelaGSE14283 11668490 11668529 39 0
Oct1 HelaGSE14283 11863625 11863654 29 0
Oct1 HelaGSE14283 11894419 11894458 39 0
Oct4 hESGSE21916 11439084 11439587 503 0
RARA MCF7GSE15244 11777799 11778412 613 0
RNAII Tamoxifen-MCF7GSE14664 11498067 11498106 39 0
Sox2 hESGSE18292 11235778 11236134 356 0
Sox2 hESGSE18292 11773137 11773319 182 0
TAF HelaGSE8489 11030876 11031202 326 0
TAF HelaGSE8489 11058207 11059351 1144 0
TAF HelaGSE8489 11065575 11065714 139 0
TAF HelaGSE8489 11122676 11122991 315 0
TAF HelaGSE8489 11233507 11234724 1217 0
TAF HelaGSE8489 11294292 11294857 565 0
TAF HelaGSE8489 11539344 11539585 241 0
TFAP2C MCF7GSE21234 11258892 11259170 278 0
TFAP2C MCF7GSE21234 11557771 11558284 513 0
TFAP2C MCF7GSE21234 11600760 11601448 688 0
TFAP2C MCF7GSE21234 11772938 11773402 464 0
TFAP2C MCF7GSE21234 11777384 11778487 1103 0
TFAP2C MCF7GSE21234 11778965 11779406 441 0
TFAP2C MCF7GSE21234 11786690 11788031 1341 0
TFAP2C MCF7GSE21234 11838891 11839339 448 0
TFAP2C MCF7GSE21234 11851613 11852038 425 0
TFAP2C MCF7GSE21234 11904401 11904891 490 0
hScc1 BcellGSE12603 11040894 11041570 676 0
hScc1 BcellGSE12603 11320443 11320800 357 0
hScc1 CdLSGSE12603 11040855 11041497 642 0
hScc1 CdLSGSE12603 11320329 11320867 538 0
hScc1 G2GSE9613 11040894 11041634 740 0
hScc1 G2GSE9613 11235484 11236178 694 0
hScc1 G2GSE9613 11320329 11321178 849 0
hScc1 G2GSE9613 11869621 11870169 548 0
p63 keratinocytesGSE17611 11548955 11549883 928 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
20713 mRNA chr5 11184014 11184339 325 mRNA CTNND2 chr5 11024951 11957110 Non-exonic Bidirectional (NOB) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved