AutismKB 2.0

Annotation Detail for NHEDC1


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Basic Information Top
Gene Symbol:NHEDC1 ( MGC131641 )
Gene Full Name: Na+/H+ exchanger domain containing 1
Band: 4q24
Quick LinksEntrez ID:150159; OMIM: 611527; Uniprot ID:NHDC1_HUMAN; ENSEMBL ID: ENSG00000164037; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Post Translation Modification Top
Validated transcription factor binding site by ChIP-Chip and ChIP-Seq
  • RefSeq ID: NM_139173
  • Location:chr4 104041535-104160324
  • strand:-
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
H3K4me2 HCT116GSE10453 104160455 104160873 418 340
H3K4me3 colorectalcancer 104160873 104161189 316 707
PHF8 Hs68minusFBSGSE20725 104159938 104160816 878 53
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
hScc1 BcellGSE12603 104038039 104038327 288 3353
Transcrip Factors Experimental Cell Database TF Binding Start TF Binding End TF Binding Length The Distance to Gene
CTCF CD4GSE12889 104149762 104150031 269 0
CTCF CD4SISSRdata 104149762 104150031 269 0
CTCF G2GSE9613 104053800 104054007 207 0
CTCF G2GSE9613 104087634 104087957 323 0
CTCF G2GSE9613 104102448 104102633 185 0
CTCF G2GSE9613 104160112 104160352 240 0
KLF4 hESGSE17917 104160205 104160443 238 0
NRSF JurkatGSE13047 104143017 104143567 550 0
NRSF mAbJurkat 104143108 104144137 1029 0
NRSF-mono JurkatQuESTdata 104143121 104143566 445 0
NRSF-poly JurkatQuESTdata 104143141 104143551 410 0
Nanog hESGSE18292 104149696 104150205 509 0
Oct1 HelaGSE14283 104058959 104058998 39 0
P300 T30-glioblastomaGSE21026 104159687 104160846 1159 0
Sox2 hESGSE18292 104149705 104150212 507 0
hScc1 BcellGSE12603 104053800 104054007 207 0
hScc1 BcellGSE12603 104149738 104150069 331 0
hScc1 CdLSGSE12603 104149738 104150260 522 0
hScc1 G2GSE9613 104053800 104054007 207 0
Validated miRNA targets Top
Cis-Nats regulation Top
Cluster ID Plue Type Plus Gene Name Plus Chromosome Plus Start Plus End Overlap Length Minus Type Minus Gene Name Minus Chromosome Minus Star Minus End Type
20033 mRNA LOC493856 chr4 104147803 104167315 74 mRNA LOC150159 chr4 104163800 104298411Sense/Antisense (SA) pairs

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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