Annotation Detail for ARL6IP6

View Evidences	View Variants	View Annotations

Basic Information Top

Gene Symbol:	ARL6IP6 ( MGC33864,PFAAP1 )
Gene Full Name:	ADP-ribosylation-like factor 6 interacting protein 6
Band:	2q23.3
Quick Links	Entrez ID:151188; OMIM: NA; Uniprot ID:AR6P6_HUMAN; ENSEMBL ID: ENSG00000177917; HGNC ID: 24048
Relate to Another Database:	SFARIGene; denovo-db

Post Translation Modification

Validated transcription factor binding site by ChIP-Chip and ChIP-Seq

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
CTCF	G2	GSE9613	153281677	153282348	671	1363
ETS1	Jurkat	GSE17954	153281355	153283819	2464	789
Fos	K562	GSE19551	153281769	153282787	1018	1098
H3K4me2	HCT116	GSE10453	153281163	153281677	514	1956
H3K4me3	colorectal	cancer	153280817	153281899	1082	2018
H3ac	HepG2	E	153281054	153282079	1025	1809
LIN9	S	GSE7516	153282725	153283770	1045	128
Oct1	H2O2-Hela	GSE14283	153280721	153280749	28	2641
Oct1	Hela	GSE14283	153272224	153272252	28	11138
Oct1	Hela	GSE14283	153273095	153273134	39	10261
Oct1	Hela	GSE14283	153279599	153279625	26	3764
Rb	Growing	GSE19898	153282156	153282302	146	1147
Rb	Quiescent	GSE19898	153282684	153283090	406	489
Rb	Senescent	GSE19898	153282145	153282321	176	1143
Rb	Senescent	GSE19898	153282416	153284217	1801	59
Rb	shRbQuiescent	GSE19898	153282577	153282972	395	601
Rb	shRbQuiescent	GSE19898	153283036	153283509	473	103
TAF	Hela	GSE8489	153281163	153281829	666	1880
TAF	k562	GSE8489	153279680	153280197	517	3437
TAF	k562	GSE8489	153280636	153281829	1193	2143
TFAP2C	MCF7	GSE21234	153281958	153283034	1076	880
USF2	HepG2	E	153282652	153283378	726	361
p130	Quiescent	GSE19898	153282091	153282424	333	1118
p130	Quiescent	GSE19898	153282457	153282573	116	861
p130	Quiescent	GSE19898	153282687	153283684	997	190
p130	Senescent	GSE19898	153281719	153283935	2216	549
p130	shRbQuiescent	GSE19898	153281600	153283023	1423	1064
p130	shRbSenescent	GSE19898	153281959	153282366	407	1213
p130	shRbSenescent	GSE19898	153282408	153283952	1544	196

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length	The Distance to Gene
ER	E2-MCF7	GSE14664	153341042	153341113	71	15409
Oct1	H2O2-Hela	GSE14283	153330505	153330541	36	4855
Oct1	Hela	GSE14283	153330505	153330541	36	4855
Oct1	Hela	GSE14283	153331661	153331693	32	6009

Transcrip Factors	Experimental Cell	Database	TF Binding Start	TF Binding End	TF Binding Length
CTCF	G2	GSE9613	153283132	153283734	602
FOXA1	MCF7	GSE15244	153295457	153296244	787
H3K4me3	colorectal	cancer	153284074	153284959	885
LIN9	G0	GSE7516	153283132	153283663	531
Oct1	Hela	GSE14283	153296890	153296922	32
Oct1	Hela	GSE14283	153307425	153307453	28
Oct1	Hela	GSE14283	153318380	153318418	38
Oct1	Hela	GSE14283	153322641	153322679	38
Rb	Growing	GSE19898	153283204	153283765	561
Rb	Growing	GSE19898	153283769	153283946	177
Rb	Quiescent	GSE19898	153283148	153283982	834
Rb	shRbSenescence	GSE19898	153283220	153283593	373
TAF	k562	GSE8489	153283806	153285097	1291
TFAP2C	MCF7	GSE21234	153283663	153284157	494
p130	shRbQuiescent	GSE19898	153283045	153283814	769

Validated miRNA targets

Cis-Nats regulation

Cluster ID	Plue Type	Plus Gene Name	Plus Chromosome	Plus Start	Plus End	Overlap Length	Minus Type	Minus Gene Name	Minus Chromosome	Minus Star	Minus End	Type
15149	mRNA	ARL6IP6	chr2	153399935	153443199	95	EST		chr2	153363247	153400030	Non-exonic Bidirectional (NOB) pairs

Simple Query:

Paper Collected: 6/30/2018

Last Update: 8/26/2018